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Protein
Submitted name:

MS4A7 protein

Gene

Ms4a7

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
MS4A7 proteinImported
Submitted name:
Protein Ms4a7Imported
Gene namesi
Name:Ms4a7Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 19

Organism-specific databases

MGIiMGI:1918846. Ms4a7.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei53 – 7220HelicalSequence analysisAdd
BLAST
Transmembranei84 – 10219HelicalSequence analysisAdd
BLAST
Transmembranei123 – 14321HelicalSequence analysisAdd
BLAST
Transmembranei172 – 19524HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000064534.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IKSY. Eukaryota.
ENOG4111578. LUCA.
GeneTreeiENSGT00510000047037.
HOVERGENiHBG052387.
OrthoDBiEOG7XPZ7D.
PhylomeDBiQ99N04.
TreeFamiTF335157.

Family and domain databases

InterProiIPR007237. CD20-like.
IPR030417. MS4A.
IPR030423. MS4A7.
[Graphical view]
PANTHERiPTHR23320. PTHR23320. 1 hit.
PTHR23320:SF8. PTHR23320:SF8. 1 hit.
PfamiPF04103. CD20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q99N04-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLQLGTKNI GWDCFPKDII IHKREKTGHT YEKEDDLLIG VPSEATVLGT
60 70 80 90 100
IQLLCALILA SFGGILVSAS YFNPEVSTTL ISGYLFIGSL CFAIAGILSI
110 120 130 140 150
ISEKISTKPF ALSSLASNVA SSVVAVIGLF LFTYCLIALG SAFPHCNSEK
160 170 180 190 200
KFLSLLSYLK SHHWKNEDKN CYLAYVGAMS ALGMMLLFTV LEVFLAGYSS
210 220 230
IFWWKQVYSN KPGGTFFLPQ SQDHTQLVKS NLLQ
Length:234
Mass (Da):25,740
Last modified:October 1, 2001 - v2
Checksum:i5868AC8701BF16D0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134839 Genomic DNA. No translation available.
AF237917 mRNA. Translation: AAK37607.2.
AK149890 mRNA. Translation: BAE29148.1.
RefSeqiNP_001263327.1. NM_001276398.1.
NP_082112.3. NM_027836.6.
UniGeneiMm.491251.

Genome annotation databases

EnsembliENSMUST00000067532; ENSMUSP00000064534; ENSMUSG00000024672.
GeneIDi109225.
UCSCiuc008grz.3. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134839 Genomic DNA. No translation available.
AF237917 mRNA. Translation: AAK37607.2.
AK149890 mRNA. Translation: BAE29148.1.
RefSeqiNP_001263327.1. NM_001276398.1.
NP_082112.3. NM_027836.6.
UniGeneiMm.491251.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000064534.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000067532; ENSMUSP00000064534; ENSMUSG00000024672.
GeneIDi109225.
UCSCiuc008grz.3. mouse.

Organism-specific databases

CTDi58475.
MGIiMGI:1918846. Ms4a7.

Phylogenomic databases

eggNOGiENOG410IKSY. Eukaryota.
ENOG4111578. LUCA.
GeneTreeiENSGT00510000047037.
HOVERGENiHBG052387.
OrthoDBiEOG7XPZ7D.
PhylomeDBiQ99N04.
TreeFamiTF335157.

Miscellaneous databases

NextBioi361791.
SOURCEiSearch...

Family and domain databases

InterProiIPR007237. CD20-like.
IPR030417. MS4A.
IPR030423. MS4A7.
[Graphical view]
PANTHERiPTHR23320. PTHR23320. 1 hit.
PTHR23320:SF8. PTHR23320:SF8. 1 hit.
PfamiPF04103. CD20. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Bone marrowImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Bone marrowImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Bone marrowImported.
  4. "Identification of a CD20-, Fc-epsilon-RI-beta-, and HTm4-related gene family: sixteen new MS4A family members expressed in human and mouse."
    Liang Y., Tedder T.F.
    Genomics 72:119-127(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Mammary glandImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Bone marrowImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Bone marrowImported.
  7. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Bone marrowImported.
  8. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Bone marrowImported.
  9. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Bone marrowImported.
  10. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  11. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ99N04_MOUSE
AccessioniPrimary (citable) accession number: Q99N04
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: October 1, 2001
Last modified: April 13, 2016
This is version 91 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.