Q99LY0 (Q99LY0_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Rpn1 protein EMBL AAH02175.1

Gene names

Name:

Rpn1 EMBL AAH02175.1 MGI 98084

Organism

Mus musculus (Mouse) EMBL AAH02175.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	280 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	protein glycosylation Inferred from electronic annotation. Source: InterPro
Cellular_component	endoplasmic reticulum membrane Inferred from direct assay PubMed 9930704. Source: MGI integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	dolichyl-diphosphooligosaccharide-protein glycotransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAH02175.1

Sequences

	Sequence		Length	Mass (Da)
	Q99LY0 [UniParc]. Last modified June 1, 2001. Version 1. Checksum: F707C43DDAB88236	FASTA	280	32,166
	10 20 30 40 50 60 THYIVGYNLP SYEYLYNLGD QYALKMRFVD HVFDEQVIDS LTVKIILPEG AKNIQVDSPY 70 80 90 100 110 120 DISRAPDELH YTYLDTFGRP VIVAYKKNLV EQHIQDIVVH YTFNKVLMLQ EPLLVVAAFY 130 140 150 160 170 180 ILFFTVIIYV RLDFSITKDP AAEARMKVAC ITEQVLTLVN KRLGLYRHFD ETVNRYKQSR 190 200 210 220 230 240 DISTLNSGKK SLETEHKAVT SEIAVLQSRL KTEGSDLCDR VSEMQKLDAQ VKELVLKSAV 250 260 270 280 EAERLVAGKL KKDTYLENEK LSSGKRQELV TKIDHILDAL

References

[1]

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J. Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: Mix FVB/N EMBL AAH02175.1. Tissue: Mammary tumor. WAP-TGF alpha model. 7 months old EMBL AAH02175.1.

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC002175 mRNA. Translation: AAH02175.1.
IPI	IPI00309035.
UniGene	Mm.188544.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q99LY0.
Proteomic databases
PRIDE	Q99LY0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
MGI	MGI:98084. Rpn1.
Phylogenomic databases
HOVERGEN	HBG012864.
InParanoid	Q99LY0.
Gene expression databases
ArrayExpress	Q99LY0.
Bgee	Q99LY0.
Genevestigator	Q99LY0.
Family and domain databases
InterPro	IPR007676. Ribophorin_I. [Graphical view]
PANTHER	PTHR21049. PTHR21049. 1 hit.
Pfam	PF04597. Ribophorin_I. 1 hit. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	RPN1. mouse.
SOURCE	Search...

Entry information

Entry name

Q99LY0_MOUSE

Accession

Primary (citable) accession number: Q99LY0

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2001
Last sequence update:	June 1, 2001
Last modified:	March 6, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)