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Q99LY0 (Q99LY0_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Rpn1 EMBL AAH02175.1 MGI 98084
OrganismMus musculus (Mouse) EMBL AAH02175.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length280 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAH02175.1

Sequences

Sequence LengthMass (Da)Tools
Q99LY0 [UniParc].

Last modified June 1, 2001. Version 1.
Checksum: F707C43DDAB88236

FASTA28032,166
        10         20         30         40         50         60 
THYIVGYNLP SYEYLYNLGD QYALKMRFVD HVFDEQVIDS LTVKIILPEG AKNIQVDSPY 

        70         80         90        100        110        120 
DISRAPDELH YTYLDTFGRP VIVAYKKNLV EQHIQDIVVH YTFNKVLMLQ EPLLVVAAFY 

       130        140        150        160        170        180 
ILFFTVIIYV RLDFSITKDP AAEARMKVAC ITEQVLTLVN KRLGLYRHFD ETVNRYKQSR 

       190        200        210        220        230        240 
DISTLNSGKK SLETEHKAVT SEIAVLQSRL KTEGSDLCDR VSEMQKLDAQ VKELVLKSAV 

       250        260        270        280 
EAERLVAGKL KKDTYLENEK LSSGKRQELV TKIDHILDAL 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: Mix FVB/N EMBL AAH02175.1.
Tissue: Mammary tumor. WAP-TGF alpha model. 7 months old EMBL AAH02175.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC002175 mRNA. Translation: AAH02175.1.
UniGeneMm.188544.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ99LY0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:98084. Rpn1.

Phylogenomic databases

HOVERGENHBG012864.
InParanoidQ99LY0.

Gene expression databases

ArrayExpressQ99LY0.
BgeeQ99LY0.
GenevestigatorQ99LY0.

Family and domain databases

InterProIPR007676. Ribophorin_I.
[Graphical view]
PANTHERPTHR21049. PTHR21049. 1 hit.
PfamPF04597. Ribophorin_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSRPN1. mouse.
SOURCESearch...

Entry information

Entry nameQ99LY0_MOUSE
AccessionPrimary (citable) accession number: Q99LY0
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: March 19, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)