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Protein

Tetraspanin

Gene

Tspan6

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
TetraspaninUniRule annotation
Gene namesi
Name:Tspan6Imported
Synonyms:Tm4sf6Imported
ORF Names:mCG_9501Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi

Organism-specific databases

MGIiMGI:1926264 Tspan6

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei21 – 42HelicalUniRule annotationAdd BLAST22
Transmembranei62 – 80HelicalUniRule annotationAdd BLAST19
Transmembranei92 – 114HelicalUniRule annotationAdd BLAST23
Transmembranei211 – 233HelicalUniRule annotationAdd BLAST23

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMUSG00000067377

Family & Domainsi

Sequence similaritiesi

Belongs to the tetraspanin (TM4SF) family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3882 Eukaryota
ENOG4111IRY LUCA
GeneTreeiENSGT00880000137851
HOVERGENiHBG107306
KOiK17295
OMAiIQRTLHC
OrthoDBiEOG091G0NJA
TreeFamiTF352891

Family and domain databases

Gene3Di1.10.1450.10, 1 hit
InterProiView protein in InterPro
IPR000301 Tetraspanin
IPR018499 Tetraspanin/Peripherin
IPR018503 Tetraspanin_CS
IPR008952 Tetraspanin_EC2_sf
PfamiView protein in Pfam
PF00335 Tetraspannin, 1 hit
PIRSFiPIRSF002419 Tetraspanin, 1 hit
PRINTSiPR00259 TMFOUR
SUPFAMiSSF48652 SSF48652, 1 hit
PROSITEiView protein in PROSITE
PS00421 TM4_1, 1 hit

Sequencei

Sequence statusi: Complete.

Q99L96-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASPSRRLQT KPVITCLKSV LLIYTFIFWI TGVILLAVGI WGKVSLENYF
60 70 80 90 100
SLLNEKATNV PFVLIGTGTV IILLGTFGCF ATCRASAWML KLYAMFLTLI
110 120 130 140 150
FLVELVAAIV GFVFRHEIKN SFKSNYENAL KEYNSTGDYR SEAVDKIQST
160 170 180 190 200
LHCCGVTNYG DWKGTNYYSE TGFPKSCCKL EGCYPQRDAD KVNEEGCFIK
210 220 230 240
VMTTIESEMG VVAGISFGVA CFQLIGIFLA YCLSRAITNN QYEIV
Length:245
Mass (Da):27,303
Last modified:June 1, 2001 - v1
Checksum:i895142C6381037A4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL691421 Genomic DNA No translation available.
BC003733 mRNA Translation: AAH03733.1
BC110314 mRNA Translation: AAI10315.1
AK146673 mRNA Translation: BAE27349.1
AK149204 mRNA Translation: BAE28764.1
AK167384 mRNA Translation: BAE39476.1
CH466598 Genomic DNA Translation: EDL20414.1
RefSeqiNP_062630.2, NM_019656.3
UniGeneiMm.46701

Genome annotation databases

EnsembliENSMUST00000087557; ENSMUSP00000084838; ENSMUSG00000067377
GeneIDi56496
KEGGimmu:56496
UCSCiuc009ufa.1 mouse

Similar proteinsi

Entry informationi

Entry nameiQ99L96_MOUSE
AccessioniPrimary (citable) accession number: Q99L96
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: April 25, 2018
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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