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Protein

Probable ribosome biogenesis protein RLP24

Gene

Rsl24d1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Involved in the biogenesis of the 60S ribosomal subunit. Ensures the docking of GTPBP4/NOG1 to pre-60S particles (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processRibosome biogenesis

Names & Taxonomyi

Protein namesi
Recommended name:
Probable ribosome biogenesis protein RLP24
Alternative name(s):
Ribosomal L24 domain-containing protein 1
Ribosomal protein L24-like
Gene namesi
Name:Rsl24d1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 9

Organism-specific databases

MGIiMGI:2681840 Rsl24d1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001368971 – 163Probable ribosome biogenesis protein RLP24Add BLAST163

Proteomic databases

EPDiQ99L28
MaxQBiQ99L28
PaxDbiQ99L28
PRIDEiQ99L28

PTM databases

iPTMnetiQ99L28
PhosphoSitePlusiQ99L28

Expressioni

Gene expression databases

BgeeiENSMUSG00000032215
CleanExiMM_BC003885
ExpressionAtlasiQ99L28 baseline and differential
GenevisibleiQ99L28 MM

Interactioni

Subunit structurei

Associated with nucleolar and cytoplasmic pre-60S particles. At the end of biogenesis it dissociates from cytoplasmic pre-60S particles and is likely to be exchanged for its ribosomal homolog, RPL24 (By similarity).By similarity

Protein-protein interaction databases

BioGridi230370, 1 interactor
STRINGi10090.ENSMUSP00000034738

Structurei

3D structure databases

ProteinModelPortaliQ99L28
SMRiQ99L28
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1723 Eukaryota
COG2075 LUCA
GeneTreeiENSGT00550000074895
HOGENOMiHOG000184344
HOVERGENiHBG105577
InParanoidiQ99L28
KOiK02896
OMAiCSSRIYP
PhylomeDBiQ99L28
TreeFamiTF314926

Family and domain databases

CDDicd00472 Ribosomal_L24e_L24, 1 hit
Gene3Di2.30.170.20, 1 hit
HAMAPiMF_00773 Ribosomal_L24e, 1 hit
InterProiView protein in InterPro
IPR038630 L24e/L24_sf
IPR023438 Ribosomal_L24e
IPR000988 Ribosomal_L24e-rel
IPR023442 Ribosomal_L24e_CS
IPR011017 TRASH_dom
PANTHERiPTHR10792 PTHR10792, 1 hit
PfamiView protein in Pfam
PF01246 Ribosomal_L24e, 1 hit
SMARTiView protein in SMART
SM00746 TRASH, 1 hit
PROSITEiView protein in PROSITE
PS01073 RIBOSOMAL_L24E, 1 hit

Sequencei

Sequence statusi: Complete.

Q99L28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRIEKCYFCS GPIYPGHGMM FVRNDCKVFR FCKSKCHKNF KKKRNPRKVR
60 70 80 90 100
WTKAFRKAAG KELTVDNSFE FEKRRNEPVK YQRELWNKTI DAMKRVEEIK
110 120 130 140 150
QKRQAKFIMN RLKKNKELQK VQDIKEVKQN IHLIRAPLAG KGKQLEEKMV
160
QQLQEDVDME EAS
Length:163
Mass (Da):19,611
Last modified:June 1, 2001 - v1
Checksum:i5393707FEA8CC417
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC003885 mRNA Translation: AAH03885.1
CCDSiCCDS40688.1
RefSeqiNP_941011.1, NM_198609.2
UniGeneiMm.379366

Genome annotation databases

EnsembliENSMUST00000034738; ENSMUSP00000034738; ENSMUSG00000032215
GeneIDi225215
KEGGimmu:225215
UCSCiuc009qra.1 mouse

Similar proteinsi

Entry informationi

Entry nameiRLP24_MOUSE
AccessioniPrimary (citable) accession number: Q99L28
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 27, 2004
Last sequence update: June 1, 2001
Last modified: April 25, 2018
This is version 123 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health