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Protein

Protein RTF2 homolog

Gene

Rtfdc1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Protein RTF2 homolog
Alternative name(s):
Replication termination factor 2 domain-containing protein 1
Gene namesi
Name:Rtfdc1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1913654 Rtfdc1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000794281 – 307Protein RTF2 homologAdd BLAST307

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei288PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

EPDiQ99K95
MaxQBiQ99K95
PaxDbiQ99K95
PRIDEiQ99K95

PTM databases

iPTMnetiQ99K95
PhosphoSitePlusiQ99K95
SwissPalmiQ99K95

Expressioni

Gene expression databases

BgeeiENSMUSG00000027502
CleanExiMM_2410001C21RIK
GenevisibleiQ99K95 MM

Interactioni

Protein-protein interaction databases

BioGridi211448, 6 interactors
IntActiQ99K95, 6 interactors
STRINGi10090.ENSMUSP00000029005

Structurei

3D structure databases

ProteinModelPortaliQ99K95
SMRiQ99K95
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the rtf2 family.Curated

Phylogenomic databases

eggNOGiKOG3113 Eukaryota
ENOG41113CN LUCA
GeneTreeiENSGT00390000010923
HOGENOMiHOG000230885
HOVERGENiHBG051164
InParanoidiQ99K95
OMAiPCGHVFA
OrthoDBiEOG091G0OWI
PhylomeDBiQ99K95
TreeFamiTF314621

Family and domain databases

InterProiView protein in InterPro
IPR006735 Rtf2
IPR027799 Rtf2_RING-finger
PANTHERiPTHR12775 PTHR12775, 1 hit
PfamiView protein in Pfam
PF04641 Rtf2, 1 hit

Sequencei

Sequence statusi: Complete.

Q99K95-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGCDGGTIPK RHELVKGPKK VEKVDKDAEL VAQWNYCTLS QEILRRPIVA
60 70 80 90 100
CELGRLYNKD AVIEFLLDKS AEKALGKAAS HIRSIKNVTE LRLSDNPAWE
110 120 130 140 150
GDKGNTKGDK HDDLQRARFI CPVVGLEMNG RHRFCFLRCC GCVFSERALK
160 170 180 190 200
EIKAEVCHTC GAAFQEEDII VLNGTKEDVE MLKKRMEERR LRAKLEKKTK
210 220 230 240 250
KPKTATECAS KPGTTQDSAG PSKVKSGKPE EADPDPREKK STPAPRGAAT
260 270 280 290 300
NGSASGKVGK PPCGALKRSI ADSEESETYK SIFTSHSSAK RSKEESAHWV

THTSYCF
Length:307
Mass (Da):33,935
Last modified:June 1, 2001 - v1
Checksum:i94348165CC98B005
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK009901 mRNA Translation: BAB26573.1
AK028792 mRNA Translation: BAC26123.1
AK053258 mRNA Translation: BAC35324.1
AK077823 mRNA Translation: BAC37024.1
AK153121 mRNA Translation: BAE31736.1
AK167287 mRNA Translation: BAE39393.1
AL833787 Genomic DNA No translation available.
BC004803 mRNA Translation: AAH04803.1
BC049072 mRNA Translation: AAH49072.2
CCDSiCCDS17132.1
RefSeqiNP_079818.1, NM_025542.2
UniGeneiMm.25157

Genome annotation databases

EnsembliENSMUST00000029005; ENSMUSP00000029005; ENSMUSG00000027502
GeneIDi66404
KEGGimmu:66404
UCSCiuc008ocw.1 mouse

Similar proteinsi

Entry informationi

Entry nameiRTF2_MOUSE
AccessioniPrimary (citable) accession number: Q99K95
Secondary accession number(s): A2APA0
, Q543D3, Q80X88, Q9CV27
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 10, 2002
Last sequence update: June 1, 2001
Last modified: April 25, 2018
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health