Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

RNA-binding protein 43

Gene

Rbm43

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
RNA-binding protein 43
Alternative name(s):
RNA-binding motif protein 43
Gene namesi
Name:Rbm43
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1918934. Rbm43.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002642481 – 343RNA-binding protein 43Add BLAST343

Proteomic databases

MaxQBiQ99J64.
PaxDbiQ99J64.
PeptideAtlasiQ99J64.
PRIDEiQ99J64.

PTM databases

PhosphoSitePlusiQ99J64.

Expressioni

Gene expression databases

BgeeiENSMUSG00000036249.
CleanExiMM_RBM43.
GenevisibleiQ99J64. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000099828.

Structurei

3D structure databases

ProteinModelPortaliQ99J64.
SMRiQ99J64.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini15 – 90RRMPROSITE-ProRule annotationAdd BLAST76

Phylogenomic databases

eggNOGiKOG4012. Eukaryota.
ENOG4112541. LUCA.
GeneTreeiENSGT00390000007352.
HOGENOMiHOG000231959.
HOVERGENiHBG080503.
InParanoidiQ99J64.
OMAiHIDIIGS.
OrthoDBiEOG091G0CSW.
PhylomeDBiQ99J64.
TreeFamiTF335737.

Family and domain databases

InterProiView protein in InterPro
IPR035979. RBD_domain_sf.
IPR034463. RBM43.
IPR000504. RRM_dom.
PANTHERiPTHR15225:SF8. PTHR15225:SF8. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.

Sequencei

Sequence statusi: Complete.

Q99J64-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASAWKVKDP TVAERTVVVS GLPVGLLKDQ LVKCYFQDEG GHVEEVIYPS
60 70 80 90 100
KSKGVAYIIF KEKKVAQDFI RQKKHPPGSE PRLTVSHFSE KVFNYVMAIL
110 120 130 140 150
DLSVFRTQIE LESLVVDLKK KIPTLNFSPL GPSGKISVQG SFLAIMKLKQ
160 170 180 190 200
ALISKAISPL ENNRKDAGER RNWNGENPRR ILQKRENSAS ILGTFVAEPA
210 220 230 240 250
GSPETLVLDT DIFLYLKHKC EFYHLTLSKY HVLCQERVDG DVTTICLQDA
260 270 280 290 300
QDGSCSGSVR HVKEFIEECA QEFHLELRKE LLVLEGMGDR EKRNIRQALE
310 320 330 340
ELGGRYPRVL TNVHSTHIDL IGPPSDTYLF KTQLMKSAGQ KVT
Length:343
Mass (Da):38,637
Last modified:June 1, 2001 - v1
Checksum:i1CCF5B9E21374B16
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK002739 mRNA. Translation: BAC25004.1.
BC003333 mRNA. Translation: AAH03333.1.
CCDSiCCDS16030.1.
RefSeqiNP_001135453.1. NM_001141981.1.
NP_001135454.1. NM_001141982.1.
NP_084519.1. NM_030243.4.
XP_006498403.1. XM_006498340.1.
XP_006498404.1. XM_006498341.1.
XP_006498405.1. XM_006498342.3.
XP_006498406.1. XM_006498343.3.
XP_006498407.1. XM_006498344.2.
XP_006498408.1. XM_006498345.1.
XP_011237487.1. XM_011239185.1.
XP_011237489.1. XM_011239187.1.
UniGeneiMm.28309.

Genome annotation databases

EnsembliENSMUST00000102767; ENSMUSP00000099828; ENSMUSG00000036249.
ENSMUST00000102768; ENSMUSP00000099829; ENSMUSG00000036249.
ENSMUST00000165313; ENSMUSP00000126129; ENSMUSG00000036249.
GeneIDi71684.
KEGGimmu:71684.
UCSCiuc008jqk.2. mouse.

Similar proteinsi

Entry informationi

Entry nameiRBM43_MOUSE
AccessioniPrimary (citable) accession number: Q99J64
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: June 1, 2001
Last modified: October 25, 2017
This is version 123 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot