Q99873 (ANM1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 113.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Protein arginine N-methyltransferase 1 EC=2.1.1.- Alternative name(s): Histone-arginine N-methyltransferase PRMT1 EC=2.1.1.125 Interferon receptor 1-bound protein 4 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 361 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Arginine methyltransferase that methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues present in proteins such as ESR1, histone H2, H3 and H4, PIAS1, HNRNPA1, HNRNPD, NFATC2IP, SUPT5H, TAF15 and EWS. Constitutes the main enzyme that mediates monomethylation and asymmetric dimethylation of histone H4 'Arg-4' (H4R3me1 and H4R3me2a, respectively), a specific tag for epigenetic transcriptional activation. Together with dimethylated PIAS1, represses STAT1 transcriptional activity, in the late phase of interferon gamma (IFN-gamma) signaling. May be involved in the regulation of TAF15 transcriptional activity, act as an activator of estrogen receptor (ER)-mediated transactivation, play a key role in neurite outgrowth and act as a negative regulator of megakaryocytic differentiation, by modulating p38 MAPK pathway. Methylates FOXO1 and retains it in the nucleus increasing its transcriptional acivity. Ref.11 Ref.12 Ref.13 Ref.14 Ref.16 Ref.17 Ref.18 Ref.19 Ref.20 Ref.21 |
| Catalytic activity | S-adenosyl-L-methionine + arginine-[histone] = S-adenosyl-L-homocysteine + N(omega)-methyl-arginine-[histone]. Ref.11 Ref.12 Ref.18 |
| Enzyme regulation | By BTG1, BTG2 and ILF3. |
| Subunit structure | Homodimer and heterodimer with PRMT8. Individual homodimers can associate to form a homohexamer. Interacts with BTG1, BTG2, NFATC2IP and IFNAR1 By similarity. Interacts with and methylates CHTOP, thereby enabling the interaction of CHTOP with the 5FMC complex By similarity. Interacts with ILF3 and SUPT5H. Interacts with and methylates FOXO1, leading to the nuclear retention of FOXO1 and the stimulation of FOXO1 transcriptional activity. Methylation of FOXO1 is increased upon oxidative stress. Ref.9 Ref.10 Ref.13 Ref.15 Ref.17 |
| Subcellular location | Nucleus. Nucleus › nucleoplasm By similarity. Cytoplasm › cytosol By similarity. Note: Mostly found in the cytoplasm. Colocalizes with CHTOP within the nucleus. Low levels detected also in the chromatin fraction By similarity. Ref.20 |
| Tissue specificity | Widely expressed. Ref.3 |
| Sequence similarities | Belongs to the protein arginine N-methyltransferase family. |
| Biophysicochemical properties | Kinetic parameters: KM=1 µM for AdoMet Ref.18 KM=4.2 µM for H4 Vmax=1.2 nmol/min/mg enzyme toward AdoMet Vmax=1.24 nmol/min/mg enzyme toward H4 |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| CHTOP | Q9Y3Y2 | 2 | EBI-78738,EBI-347794 | |
| DHX9 | Q08211 | 2 | EBI-78738,EBI-352022 | |
| gag | P04591 | 2 | EBI-78738,EBI-6179727 | From a different organism. |
| HABP4 | Q5JVS0 | 2 | EBI-78738,EBI-523625 | |
| ILF3 | Q12906 | 2 | EBI-78738,EBI-78756 |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q99873-1) Also known as: V2; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q99873-2) Also known as: V3; The sequence of this isoform differs from the canonical sequence as follows: 1-19: MENFVATLANGMSLQPPLE → MVGVA | ||||||
| Isoform 3 (identifier: Q99873-3) Also known as: V1; The sequence of this isoform differs from the canonical sequence as follows: 1-19: MENFVATLANGMSLQPPLE → M | ||||||
| Isoform 4 (identifier: Q99873-4) The sequence of this isoform differs from the canonical sequence as follows: 1-19: MENFVATLANGMSLQPPLE → MAAAEAANCIM |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 361 | 361 | Protein arginine N-methyltransferase 1 | PRO_0000212321 | |||||
Sites | |||||||||
| Active site | 152 | 1 | By similarity | ||||||
| Active site | 161 | 1 | By similarity | ||||||
| Binding site | 53 | 1 | S-adenosyl-L-methionine By similarity | ||||||
| Binding site | 62 | 1 | S-adenosyl-L-methionine By similarity | ||||||
| Binding site | 86 | 1 | S-adenosyl-L-methionine; via carbonyl oxygen By similarity | ||||||
| Binding site | 108 | 1 | S-adenosyl-L-methionine By similarity | ||||||
| Binding site | 137 | 1 | S-adenosyl-L-methionine By similarity | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 19 | 19 | MENFV…QPPLE → MVGVA in isoform 2. | VSP_005208 | |||||
| Alternative sequence | 1 – 19 | 19 | MENFV…QPPLE → M in isoform 3. | VSP_005209 | |||||
| Alternative sequence | 1 – 19 | 19 | MENFV…QPPLE → MAAAEAANCIM in isoform 4. | VSP_046334 | |||||
| Natural variant | 78 | 1 | K → M. Corresponds to variant rs1804486 [ dbSNP | Ensembl ]. | VAR_037501 | |||||
| Natural variant | 158 | 1 | L → F. Corresponds to variant rs11673683 [ dbSNP | Ensembl ]. | VAR_037502 | |||||
Experimental info | |||||||||
| Mutagenesis | 82 | 1 | V → A: Loss of FOXO1 methylation, its nuclear retention, and transcriptional activity. Ref.15 | ||||||
| Mutagenesis | 83 | 1 | L → A: Loss of FOXO1 methylation, its nuclear retention, and transcriptional activity. Ref.15 | ||||||
| Mutagenesis | 84 | 1 | D → A: Loss of FOXO1 methylation, its nuclear retention, and transcriptional activity. Ref.15 | ||||||
| Sequence conflict | 108 | 1 | E → V in CAA71763. Ref.1 | ||||||
| Sequence conflict | 108 | 1 | E → V in CAA71764. Ref.1 | ||||||
| Sequence conflict | 108 | 1 | E → V in CAA71765. Ref.1 | ||||||
| Sequence conflict | 108 | 1 | E → V in BAA11029. Ref.2 | ||||||
| Sequence conflict | 147 – 175 | 29 | DIIIS…RDKWL → ASSSASGWATASSTSPCSTP CSMPGTSV in BAA11029. Ref.2 | ||||||
| Sequence conflict | 202 | 1 | K → E in BAG65435. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Identification and characterization of two putative human arginine methyltransferases (HRMT1L1 and HRMT1L2)." Scott H.S., Antonarakis S.E., Lalioti M.D., Rossier C., Silver P.A., Henry M.F. Genomics 48:330-340(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], ALTERNATIVE SPLICING. |
| [2] | "Structural and functional conservation of human and yeast HCP1 genes which can suppress the growth defect of the Saccharomyces cerevisiae ire15 mutant." Nikawa J., Nakano H., Ohi N. Gene 171:107-111(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Tissue: Glial cell. |
| [3] | "Genomic organization, physical mapping, and expression analysis of the human protein arginine methyltransferase 1 gene." Scorilas A., Black M.H., Talieri M., Diamandis E.P. Biochem. Biophys. Res. Commun. 278:349-359(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], ALTERNATIVE SPLICING, TISSUE SPECIFICITY. |
| [4] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 4). Tissue: Uterus. |
| [5] | "Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201)." Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B. Submitted (MAY-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). |
| [6] | "The DNA sequence and biology of human chromosome 19." Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V. Lucas S.M.Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [8] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 3 AND 4). Tissue: Lung. |
| [9] | "Protein-arginine methyltransferase I, the predominant protein-arginine methyltransferase in cells, interacts with and is regulated by interleukin enhancer-binding factor 3." Tang J., Kao P.N., Herschman H.R. J. Biol. Chem. 275:19866-19876(2000) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH ILF3. |
| [10] | "The structure and oligomerization of the yeast arginine methyltransferase, Hmt1." Weiss V.H., McBride A.E., Soriano M.A., Filman D.J., Silver P.A., Hogle J.M. Nat. Struct. Biol. 7:1165-1171(2000) [PubMed] [Europe PMC] [Abstract] Cited for: SUBUNIT. |
| [11] | "Methylation of histone H4 at arginine 3 occurs in vivo and is mediated by the nuclear receptor coactivator PRMT1." Strahl B.D., Briggs S.D., Brame C.J., Caldwell J.A., Koh S.S., Ma H., Cook R.G., Shabanowitz J., Hunt D.F., Stallcup M.R., Allis C.D. Curr. Biol. 11:996-1000(2001) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN METHYLATION OF HISTONE H4, CATALYTIC ACTIVITY. |
| [12] | "Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor." Wang H., Huang Z.-Q., Xia L., Feng Q., Erdjument-Bromage H., Strahl B.D., Briggs S.D., Allis C.D., Wong J., Tempst P., Zhang Y. Science 293:853-857(2001) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN METHYLATION OF HISTONE H4, CATALYTIC ACTIVITY. |
| [13] | "Methylation of SPT5 regulates its interaction with RNA polymerase II and transcriptional elongation properties." Kwak Y.T., Guo J., Prajapati S., Park K.-J., Surabhi R.M., Miller B., Gehrig P., Gaynor R.B. Mol. Cell 11:1055-1066(2003) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH SUPT5H. |
| [14] | "Regulation of estrogen rapid signaling through arginine methylation by PRMT1." Le Romancer M., Treilleux I., Leconte N., Robin-Lespinasse Y., Sentis S., Bouchekioua-Bouzaghou K., Goddard S., Gobert-Gosse S., Corbo L. Mol. Cell 31:212-221(2008) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [15] | "Arginine methylation of FOXO transcription factors inhibits their phosphorylation by Akt." Yamagata K., Daitoku H., Takahashi Y., Namiki K., Hisatake K., Kako K., Mukai H., Kasuya Y., Fukamizu A. Mol. Cell 32:221-231(2008) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH FOXO1, MUTAGENESIS OF VAL-82; LEU-83 AND ASP-84. |
| [16] | "PRMT1 and Btg2 regulates neurite outgrowth of Neuro2a cells." Miyata S., Mori Y., Tohyama M. Neurosci. Lett. 445:162-165(2008) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [17] | "Identification of proteins interacting with protein arginine methyltransferase 8: the Ewing sarcoma (EWS) protein binds independent of its methylation state." Pahlich S., Zakaryan R.P., Gehring H. Proteins 72:1125-1137(2008) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH EWS AND PRMT8. |
| [18] | "Kinetic analysis of human protein arginine N-methyltransferase 2: formation of monomethyl- and asymmetric dimethyl-arginine residues on histone H4." Lakowski T.M., Frankel A. Biochem. J. 421:253-261(2009) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, CATALYTIC ACTIVITY, BIOPHYSICOCHEMICAL PROPERTIES. |
| [19] | "PRMT1 mediated methylation of TAF15 is required for its positive gene regulatory function." Jobert L., Argentini M., Tora L. Exp. Cell Res. 315:1273-1286(2009) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [20] | "PRMT1-mediated arginine methylation of PIAS1 regulates STAT1 signaling." Weber S., Maass F., Schuemann M., Krause E., Suske G., Bauer U.M. Genes Dev. 23:118-132(2009) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION. |
| [21] | "Protein-arginine methyltransferase 1 suppresses megakaryocytic differentiation via modulation of the p38 MAPK pathway in K562 cells." Chang Y.I., Hua W.K., Yao C.L., Hwang S.M., Hung Y.C., Kuan C.J., Leou J.S., Lin W.J. J. Biol. Chem. 285:20595-20606(2010) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [22] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | Y10805 mRNA. Translation: CAA71763.1. Y10806 mRNA. Translation: CAA71764.1. Y10807 mRNA. Translation: CAA71765.1. D66904 mRNA. Translation: BAA11029.1. AF222689 Genomic DNA. Translation: AAF62893.1. AF222689 Genomic DNA. Translation: AAF62894.1. AF222689 Genomic DNA. Translation: AAF62895.1. AK304660 mRNA. Translation: BAG65435.1. CR407608 mRNA. Translation: CAG28536.1. AC011495 Genomic DNA. No translation available. CH471177 Genomic DNA. Translation: EAW52521.1. BC019268 mRNA. Translation: AAH19268.2. BC109282 mRNA. Translation: AAI09283.2. BC109283 mRNA. Translation: AAI09284.2. |
| IPI | IPI00382516. IPI01014546. IPI01018101. |
| RefSeq | NP_001527.3. NM_001536.5. NP_938074.2. NM_198318.4. |
| UniGene | Hs.20521. |
3D structure databases | |
| ProteinModelPortal | Q99873. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-30878N. |
| IntAct | Q99873. 32 interactions. |
| MINT | MINT-4861475. |
PTM databases | |
| PhosphoSite | Q99873. |
Polymorphism databases | |
| DMDM | 161789011. |
Proteomic databases | |
| PaxDb | Q99873. |
| PRIDE | Q99873. |
Protocols and materials databases | |
| DNASU | 3276. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000391851; ENSP00000375724; ENSG00000126457. |
| GeneID | 3276. |
| KEGG | hsa:3276. |
| UCSC | uc010enf.2. human. uc021uxu.1. human. |
Organism-specific databases | |
| CTD | 3276. |
| GeneCards | GC19P050181. |
| HGNC | HGNC:5187. PRMT1. |
| HPA | CAB022550. |
| MIM | 602950. gene. |
| neXtProt | NX_Q99873. |
| PharmGKB | PA29461. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG0500. |
| HOVERGEN | HBG001793. |
| InParanoid | Q99873. |
| KO | K11434. |
| OrthoDB | EOG434W66. |
| PhylomeDB | Q99873. |
Enzyme and pathway databases | |
| SABIO-RK | Q99873. |
Gene expression databases | |
| ArrayExpress | Q99873. |
| Bgee | Q99873. |
| CleanEx | HS_PRMT1. |
| Genevestigator | Q99873. |
| GermOnline | ENSG00000126457. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR025799. Arg_MeTrfase. IPR025714. Methyltranfer_dom. [Graphical view] |
| PANTHER | PTHR11006. PTHR11006. 1 hit. |
| Pfam | PF13847. Methyltransf_31. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| BindingDB | Q99873. |
| ChEMBL | CHEMBL5524. |
| ChiTaRS | PRMT1. human. |
| GenomeRNAi | 3276. |
| NextBio | 13013. |
| SOURCE | Search... |
Entry information
| Entry name | ANM1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q99873 Secondary accession number(s): B4E3C3 Q9NZ06 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 19 Human chromosome 19: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
