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Q99677

- LPAR4_HUMAN

UniProt

Q99677 - LPAR4_HUMAN

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Protein
Lysophosphatidic acid receptor 4
Gene
LPAR4, GPR23, LPA4, P2RY9
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Receptor for lysophosphatidic acid (LPA), a mediator of diverse cellular activities. Transduces a signal by increasing the intracellular calcium ions and by stimulating adenylyl cyclase activity. The rank order of potency for agonists of this receptor is 1-oleoyl- > 1-stearoyl- > 1-palmitoyl- > 1-myristoyl- > 1-alkyl- > 1-alkenyl-LPA.1 Publication

GO - Molecular functioni

  1. G-protein coupled receptor activity Source: ProtInc
  2. lipid binding Source: UniProtKB-KW

GO - Biological processi

  1. G-protein coupled receptor signaling pathway Source: ProtInc
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptor, Receptor, Transducer

Keywords - Ligandi

Lipid-binding

Enzyme and pathway databases

ReactomeiREACT_18283. G alpha (q) signalling events.
REACT_18289. P2Y receptors.

Protein family/group databases

TCDBi9.A.14.13.9. the g-protein-coupled receptor (gpcr) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Lysophosphatidic acid receptor 4
Short name:
LPA receptor 4
Short name:
LPA-4
Alternative name(s):
G-protein coupled receptor 23
P2Y purinoceptor 9
Short name:
P2Y9
P2Y5-like receptor
Purinergic receptor 9
Gene namesi
Name:LPAR4
Synonyms:GPR23, LPA4, P2RY9
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome X

Organism-specific databases

HGNCiHGNC:4478. LPAR4.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 4343Extracellular Reviewed prediction
Add
BLAST
Transmembranei44 – 6421Helical; Name=1; Reviewed prediction
Add
BLAST
Topological domaini65 – 739Cytoplasmic Reviewed prediction
Transmembranei74 – 9421Helical; Name=2; Reviewed prediction
Add
BLAST
Topological domaini95 – 11218Extracellular Reviewed prediction
Add
BLAST
Transmembranei113 – 13321Helical; Name=3; Reviewed prediction
Add
BLAST
Topological domaini134 – 15522Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei156 – 17621Helical; Name=4; Reviewed prediction
Add
BLAST
Topological domaini177 – 20327Extracellular Reviewed prediction
Add
BLAST
Transmembranei204 – 22421Helical; Name=5; Reviewed prediction
Add
BLAST
Topological domaini225 – 25430Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei255 – 27521Helical; Name=6; Reviewed prediction
Add
BLAST
Topological domaini276 – 29419Extracellular Reviewed prediction
Add
BLAST
Transmembranei295 – 31521Helical; Name=7; Reviewed prediction
Add
BLAST
Topological domaini316 – 37055Cytoplasmic Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of plasma membrane Source: ProtInc
  2. plasma membrane Source: Reactome
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162394222.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 370370Lysophosphatidic acid receptor 4
PRO_0000070033Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi15 – 151N-linked (GlcNAc...) Reviewed prediction
Glycosylationi24 – 241N-linked (GlcNAc...) Reviewed prediction
Glycosylationi28 – 281N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi111 ↔ 188 By similarity
Glycosylationi183 – 1831N-linked (GlcNAc...)1 Publication

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiQ99677.
PRIDEiQ99677.

Expressioni

Tissue specificityi

High expression in ovary. Not detected in the brain regions thalamus, putamen, caudate, frontal cortex, pons, hypothalamus and hippocampus.1 Publication

Gene expression databases

BgeeiQ99677.
CleanExiHS_LPAR4.
GenevestigatoriQ99677.

Organism-specific databases

HPAiHPA054951.
HPA055571.

Interactioni

Protein-protein interaction databases

BioGridi109105. 2 interactions.
IntActiQ99677. 1 interaction.
STRINGi9606.ENSP00000362398.

Structurei

3D structure databases

ProteinModelPortaliQ99677.
SMRiQ99677. Positions 44-322.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG147814.
HOGENOMiHOG000231307.
HOVERGENiHBG101917.
InParanoidiQ99677.
KOiK04275.
OMAiNCSLERF.
OrthoDBiEOG7K3TM5.
PhylomeDBiQ99677.
TreeFamiTF350009.

Family and domain databases

Gene3Di1.20.1070.10. 1 hit.
InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q99677-1 [UniParc]FASTAAdd to Basket

« Hide

MGDRRFIDFQ FQDSNSSLRP RLGNATANNT CIVDDSFKYN LNGAVYSVVF    50
ILGLITNSVS LFVFCFRMKM RSETAIFITN LAVSDLLFVC TLPFKIFYNF 100
NRHWPFGDTL CKISGTAFLT NIYGSMLFLT CISVDRFLAI VYPFRSRTIR 150
TRRNSAIVCA GVWILVLSGG ISASLFSTTN VNNATTTCFE GFSKRVWKTY 200
LSKITIFIEV VGFIIPLILN VSCSSVVLRT LRKPATLSQI GTNKKKVLKM 250
ITVHMAVFVV CFVPYNSVLF LYALVRSQAI TNCFLERFAK IMYPITLCLA 300
TLNCCFDPFI YYFTLESFQK SFYINAHIRM ESLFKTETPL TTKPSLPAIQ 350
EEVSDQTTNN GGELMLESTF 370
Length:370
Mass (Da):41,895
Last modified:May 1, 1997 - v1
Checksum:i20857F52A3929E48
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti49 – 491V → A in AAH69996. 1 Publication
Sequence conflicti192 – 1921F → L in AAB66322. 1 Publication
Sequence conflicti240 – 2401I → V in AAH95538. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U66578 Genomic DNA. Translation: AAC51301.1.
U90323 Genomic DNA. Translation: AAB62087.1.
U90322 mRNA. Translation: AAB62088.1.
AF005419 Genomic DNA. Translation: AAB66322.1.
AY301274 Genomic DNA. Translation: AAP58404.1.
AK314134 mRNA. Translation: BAG36824.1.
AL590083 Genomic DNA. Translation: CAD18851.1.
CH471104 Genomic DNA. Translation: EAW98596.1.
BC069996 mRNA. Translation: AAH69996.1.
BC074722 mRNA. Translation: AAH74722.1.
BC095538 mRNA. Translation: AAH95538.1.
CCDSiCCDS14441.1.
PIRiJC5549.
RefSeqiNP_001264929.1. NM_001278000.1.
NP_005287.1. NM_005296.2.
XP_005262183.1. XM_005262126.1.
XP_006724702.1. XM_006724639.1.
UniGeneiHs.522701.

Genome annotation databases

EnsembliENST00000435339; ENSP00000408205; ENSG00000147145.
GeneIDi2846.
KEGGihsa:2846.
UCSCiuc010nme.3. human.

Polymorphism databases

DMDMi2495042.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U66578 Genomic DNA. Translation: AAC51301.1 .
U90323 Genomic DNA. Translation: AAB62087.1 .
U90322 mRNA. Translation: AAB62088.1 .
AF005419 Genomic DNA. Translation: AAB66322.1 .
AY301274 Genomic DNA. Translation: AAP58404.1 .
AK314134 mRNA. Translation: BAG36824.1 .
AL590083 Genomic DNA. Translation: CAD18851.1 .
CH471104 Genomic DNA. Translation: EAW98596.1 .
BC069996 mRNA. Translation: AAH69996.1 .
BC074722 mRNA. Translation: AAH74722.1 .
BC095538 mRNA. Translation: AAH95538.1 .
CCDSi CCDS14441.1.
PIRi JC5549.
RefSeqi NP_001264929.1. NM_001278000.1.
NP_005287.1. NM_005296.2.
XP_005262183.1. XM_005262126.1.
XP_006724702.1. XM_006724639.1.
UniGenei Hs.522701.

3D structure databases

ProteinModelPortali Q99677.
SMRi Q99677. Positions 44-322.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 109105. 2 interactions.
IntActi Q99677. 1 interaction.
STRINGi 9606.ENSP00000362398.

Chemistry

ChEMBLi CHEMBL5968.
GuidetoPHARMACOLOGYi 94.

Protein family/group databases

TCDBi 9.A.14.13.9. the g-protein-coupled receptor (gpcr) family.
GPCRDBi Search...

Polymorphism databases

DMDMi 2495042.

Proteomic databases

PaxDbi Q99677.
PRIDEi Q99677.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000435339 ; ENSP00000408205 ; ENSG00000147145 .
GeneIDi 2846.
KEGGi hsa:2846.
UCSCi uc010nme.3. human.

Organism-specific databases

CTDi 2846.
GeneCardsi GC0XP078004.
HGNCi HGNC:4478. LPAR4.
HPAi HPA054951.
HPA055571.
MIMi 300086. gene.
neXtProti NX_Q99677.
PharmGKBi PA162394222.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG147814.
HOGENOMi HOG000231307.
HOVERGENi HBG101917.
InParanoidi Q99677.
KOi K04275.
OMAi NCSLERF.
OrthoDBi EOG7K3TM5.
PhylomeDBi Q99677.
TreeFami TF350009.

Enzyme and pathway databases

Reactomei REACT_18283. G alpha (q) signalling events.
REACT_18289. P2Y receptors.

Miscellaneous databases

GeneWikii LPAR4.
GenomeRNAii 2846.
NextBioi 11227.
PROi Q99677.
SOURCEi Search...

Gene expression databases

Bgeei Q99677.
CleanExi HS_LPAR4.
Genevestigatori Q99677.

Family and domain databases

Gene3Di 1.20.1070.10. 1 hit.
InterProi IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view ]
Pfami PF00001. 7tm_1. 1 hit.
[Graphical view ]
PRINTSi PR00237. GPCRRHODOPSN.
PROSITEi PS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and chromosomal mapping of four putative novel human G-protein-coupled receptor genes."
    O'Dowd B.F., Nguyen T., Jung B.P., Marchese A., Cheng R., Heng H.H.Q., Kolakowski L.F. Jr., Lynch K.R., George S.R.
    Gene 187:75-81(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Cloning, characterization and chromosomal localization of a novel human purinergic receptor (P2Y9)."
    Bohm S.K., Khitin L.M., Payan D.P., Bunnett N.W.
    Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
  3. "Cloning of a human heptahelical receptor closely related to the P2Y5 receptor."
    Janssens R., Boeynaems J.-M., Godart M., Communi D.
    Biochem. Biophys. Res. Commun. 236:106-112(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  4. "cDNA clones of human proteins involved in signal transduction sequenced by the Guthrie cDNA resource center (www.cdna.org)."
    Kopatz S.A., Aronstam R.S., Sharma S.V.
    Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  5. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Thalamus.
  6. "The DNA sequence of the human X chromosome."
    Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C.
    , Hurles M.E., Andrews T.D., Scott C.E., Searle S., Ramser J., Whittaker A., Deadman R., Carter N.P., Hunt S.E., Chen R., Cree A., Gunaratne P., Havlak P., Hodgson A., Metzker M.L., Richards S., Scott G., Steffen D., Sodergren E., Wheeler D.A., Worley K.C., Ainscough R., Ambrose K.D., Ansari-Lari M.A., Aradhya S., Ashwell R.I., Babbage A.K., Bagguley C.L., Ballabio A., Banerjee R., Barker G.E., Barlow K.F., Barrett I.P., Bates K.N., Beare D.M., Beasley H., Beasley O., Beck A., Bethel G., Blechschmidt K., Brady N., Bray-Allen S., Bridgeman A.M., Brown A.J., Brown M.J., Bonnin D., Bruford E.A., Buhay C., Burch P., Burford D., Burgess J., Burrill W., Burton J., Bye J.M., Carder C., Carrel L., Chako J., Chapman J.C., Chavez D., Chen E., Chen G., Chen Y., Chen Z., Chinault C., Ciccodicola A., Clark S.Y., Clarke G., Clee C.M., Clegg S., Clerc-Blankenburg K., Clifford K., Cobley V., Cole C.G., Conquer J.S., Corby N., Connor R.E., David R., Davies J., Davis C., Davis J., Delgado O., Deshazo D., Dhami P., Ding Y., Dinh H., Dodsworth S., Draper H., Dugan-Rocha S., Dunham A., Dunn M., Durbin K.J., Dutta I., Eades T., Ellwood M., Emery-Cohen A., Errington H., Evans K.L., Faulkner L., Francis F., Frankland J., Fraser A.E., Galgoczy P., Gilbert J., Gill R., Gloeckner G., Gregory S.G., Gribble S., Griffiths C., Grocock R., Gu Y., Gwilliam R., Hamilton C., Hart E.A., Hawes A., Heath P.D., Heitmann K., Hennig S., Hernandez J., Hinzmann B., Ho S., Hoffs M., Howden P.J., Huckle E.J., Hume J., Hunt P.J., Hunt A.R., Isherwood J., Jacob L., Johnson D., Jones S., de Jong P.J., Joseph S.S., Keenan S., Kelly S., Kershaw J.K., Khan Z., Kioschis P., Klages S., Knights A.J., Kosiura A., Kovar-Smith C., Laird G.K., Langford C., Lawlor S., Leversha M., Lewis L., Liu W., Lloyd C., Lloyd D.M., Loulseged H., Loveland J.E., Lovell J.D., Lozado R., Lu J., Lyne R., Ma J., Maheshwari M., Matthews L.H., McDowall J., McLaren S., McMurray A., Meidl P., Meitinger T., Milne S., Miner G., Mistry S.L., Morgan M., Morris S., Mueller I., Mullikin J.C., Nguyen N., Nordsiek G., Nyakatura G., O'dell C.N., Okwuonu G., Palmer S., Pandian R., Parker D., Parrish J., Pasternak S., Patel D., Pearce A.V., Pearson D.M., Pelan S.E., Perez L., Porter K.M., Ramsey Y., Reichwald K., Rhodes S., Ridler K.A., Schlessinger D., Schueler M.G., Sehra H.K., Shaw-Smith C., Shen H., Sheridan E.M., Shownkeen R., Skuce C.D., Smith M.L., Sotheran E.C., Steingruber H.E., Steward C.A., Storey R., Swann R.M., Swarbreck D., Tabor P.E., Taudien S., Taylor T., Teague B., Thomas K., Thorpe A., Timms K., Tracey A., Trevanion S., Tromans A.C., d'Urso M., Verduzco D., Villasana D., Waldron L., Wall M., Wang Q., Warren J., Warry G.L., Wei X., West A., Whitehead S.L., Whiteley M.N., Wilkinson J.E., Willey D.L., Williams G., Williams L., Williamson A., Williamson H., Wilming L., Woodmansey R.L., Wray P.W., Yen J., Zhang J., Zhou J., Zoghbi H., Zorilla S., Buck D., Reinhardt R., Poustka A., Rosenthal A., Lehrach H., Meindl A., Minx P.J., Hillier L.W., Willard H.F., Wilson R.K., Waterston R.H., Rice C.M., Vaudin M., Coulson A., Nelson D.L., Weinstock G., Sulston J.E., Durbin R.M., Hubbard T., Gibbs R.A., Beck S., Rogers J., Bentley D.R.
    Nature 434:325-337(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  7. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  8. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Brain.
  9. "Identification of p2y9/GPR23 as a novel G protein-coupled receptor for lysophosphatidic acid, structurally distant from the Edg family."
    Noguchi K., Ishii S., Shimizu T.
    J. Biol. Chem. 278:25600-25606(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, TISSUE SPECIFICITY.
  10. "Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry."
    Liu T., Qian W.-J., Gritsenko M.A., Camp D.G. II, Monroe M.E., Moore R.J., Smith R.D.
    J. Proteome Res. 4:2070-2080(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-183.
    Tissue: Plasma.

Entry informationi

Entry nameiLPAR4_HUMAN
AccessioniPrimary (citable) accession number: Q99677
Secondary accession number(s): B2RAC7
, O15132, Q502U9, Q6NSP5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: May 1, 1997
Last modified: September 3, 2014
This is version 127 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. 7-transmembrane G-linked receptors
    List of 7-transmembrane G-linked receptor entries
  2. Human chromosome X
    Human chromosome X: entries, gene names and cross-references to MIM
  3. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  4. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi