Q99519 (NEUR1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 137.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Sialidase-1 EC=3.2.1.18 Alternative name(s): Acetylneuraminyl hydrolase G9 sialidase Lysosomal sialidase N-acetyl-alpha-neuraminidase 1 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 415 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Catalyzes the removal of sialic acid (N-acetylneuramic acid) moities from glycoproteins and glycolipids. To be active, it is strictly dependent on its presence in the multienzyme complex. Appears to have a preference for alpha 2-3 and alpha 2-6 sialyl linkage. |
| Catalytic activity | Hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)- glycosidic linkages of terminal sialic acid residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates. |
| Subunit structure | Interacts with cathepsin A (protective protein), beta-galactosidase and N-acetylgalactosamine-6-sulfate sulfatase in a multienzyme complex. |
| Subcellular location | Lysosome membrane; Peripheral membrane protein; Lumenal side. Lysosome lumen. Cell membrane. Cytoplasmic vesicle. Note: Localized not only on the inner side of the lysosomal membrane and in the lysosomal lumen, but also on the plasma membrane and in intracellular vesicles. Ref.9 |
| Tissue specificity | Highly expressed in pancreas, followed by skeletal muscle, kidney, placenta, heart, lung and liver. Weakly expressed in brain. |
| Domain | A C-terminal internalization signal (YGTL) appears to allow the targeting of plasma membrane proteins to endosomes. |
| Post-translational modification | N-glycosylated. Ref.8 Phosphorylation of tyrosine within the internalization signal results in inhibition of sialidase internalization and blockage on the plasma membrane. |
| Involvement in disease | Sialidosis (SIALIDOSIS) [MIM:256550]: Lysosomal storage disease occurring as two types with various manifestations. Type 1 sialidosis (cherry red spot-myoclonus syndrome or normosomatic type) is late-onset and it is characterized by the formation of cherry red macular spots in childhood, progressive debilitating myoclonus, insiduous visual loss and rarely ataxia. The diagnosis can be confirmed by the screening of the urine for sialyloligosaccharides. Type 2 sialidosis (also known as dysmorphic type) occurs as several variants of increasing severity with earlier age of onset. It is characterized by the presence of abnormal somatic features including coarse facies and dysostosis multiplex, vertebral deformities, mental retardation, cherry-red spot/myoclonus, sialuria, cytoplasmic vacuolation of peripheral lymphocytes, bone marrow cells and conjunctival epithelial cells. |
| Sequence similarities | Belongs to the glycosyl hydrolase 33 family. Contains 4 BNR repeats. |
| Biophysicochemical properties | pH dependence: Optimum pH is 4.6. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 47 | 47 | Ref.8 | ||||||
| Chain | 48 – 415 | 368 | Sialidase-1 | PRO_0000012026 | |||||
Regions | |||||||||
| Repeat | 112 – 123 | 12 | BNR 1 | ||||||
| Repeat | 172 – 183 | 12 | BNR 2 | ||||||
| Repeat | 231 – 242 | 12 | BNR 3 | ||||||
| Repeat | 347 – 358 | 12 | BNR 4 | ||||||
| Motif | 77 – 80 | 4 | FRIP motif | ||||||
| Motif | 412 – 415 | 4 | Internalization signal | ||||||
Sites | |||||||||
| Active site | 103 | 1 | Proton acceptor By similarity | ||||||
| Active site | 370 | 1 | Nucleophile By similarity | ||||||
| Active site | 394 | 1 | Potential | ||||||
| Binding site | 78 | 1 | Substrate By similarity | ||||||
| Binding site | 280 | 1 | Substrate By similarity | ||||||
| Binding site | 341 | 1 | Substrate By similarity | ||||||
Amino acid modifications | |||||||||
| Glycosylation | 186 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 343 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 352 | 1 | N-linked (GlcNAc...) Ref.10 | ||||||
Natural variations | |||||||||
| Natural variant | 54 | 1 | V → M in SIALIDOSIS; type 1; mild mutation as residual activity is still measurable. Ref.13 | VAR_012207 | |||||
| Natural variant | 68 | 1 | G → V in SIALIDOSIS; type 2; less than 10% of activity. Ref.12 Ref.13 Ref.15 | VAR_012208 | |||||
| Natural variant | 80 | 1 | P → L in SIALIDOSIS; type 2; no enzyme activity; retained in the endoplasmic reticulum / Golgi or rapidly degraded in the lysosomes. Ref.16 | VAR_017460 | |||||
| Natural variant | 88 | 1 | G → A. Corresponds to variant rs34712643 [ dbSNP | Ensembl ]. | VAR_049203 | |||||
| Natural variant | 91 | 1 | L → R in SIALIDOSIS; type 2. Ref.1 Ref.13 | VAR_012209 | |||||
| Natural variant | 182 | 1 | S → G in SIALIDOSIS; type 1; normally processed. Ref.12 Ref.13 Ref.15 | VAR_012210 | |||||
| Natural variant | 217 | 1 | V → M in SIALIDOSIS; type 1; partial transport and residual transport activity. Ref.14 Corresponds to variant rs28940583 [ dbSNP | Ensembl ]. | VAR_012211 | |||||
| Natural variant | 219 | 1 | G → A in SIALIDOSIS; type 1; unable to reach the lysosomes. Ref.13 | VAR_012212 | |||||
| Natural variant | 225 | 1 | R → P in SIALIDOSIS; type 2; impaired enzyme folding. Ref.17 Corresponds to variant rs28940584 [ dbSNP | Ensembl ]. | VAR_018076 | |||||
| Natural variant | 227 | 1 | G → R in SIALIDOSIS; type 1 and juvenile type 2; catalytically inactive; retained in pre-lysosomal compartments. Ref.12 Ref.13 Ref.15 | VAR_012213 | |||||
| Natural variant | 231 | 1 | L → H in SIALIDOSIS; type 1; unable to reach the lysosomes. Ref.13 | VAR_012214 | |||||
| Natural variant | 240 | 1 | W → R in SIALIDOSIS; type 2; no enzyme activity; retained in the endoplasmic reticulum / Golgi or rapidly degraded in the lysosomes. Ref.15 Ref.16 | VAR_012215 | |||||
| Natural variant | 243 | 1 | G → R in SIALIDOSIS; type 1; no enzyme activity and no transport to the lysosome. Ref.14 | VAR_012216 | |||||
| Natural variant | 260 | 1 | F → Y in SIALIDOSIS; infantile type 2; catalytically inactive; rapid intralysosomal degradation. Ref.3 Ref.12 Ref.13 Ref.15 | VAR_012217 | |||||
| Natural variant | 270 | 1 | L → F in SIALIDOSIS; type 2; reduction in enzyme activity; rapid intralysosomal degradation. Ref.12 Ref.15 | VAR_012219 | |||||
| Natural variant | 270 | 1 | L → P in SIALIDOSIS. Ref.13 | VAR_012218 | |||||
| Natural variant | 294 | 1 | R → S in SIALIDOSIS; type 1; mild mutation as residual activity is still measurable. Ref.13 | VAR_012220 | |||||
| Natural variant | 298 | 1 | A → V in SIALIDOSIS; type 2; less than 10% of activity; rapid intralysosomal degradation; impaired enzyme folding. Ref.12 Ref.13 Ref.15 Ref.17 | VAR_012221 | |||||
| Natural variant | 316 | 1 | P → S in SIALIDOSIS; type 1; no enzyme activity; retained in the endoplasmic reticulum / Golgi or rapidly degraded in the lysosomes. Ref.16 | VAR_017461 | |||||
| Natural variant | 328 | 1 | G → S in SIALIDOSIS; type 1; reduction in enzyme activity. Ref.12 Ref.13 Ref.15 | VAR_012222 | |||||
| Natural variant | 335 | 1 | P → Q in SIALIDOSIS; type 2; unable to reach the lysosomes. Ref.13 | VAR_012223 | |||||
| Natural variant | 341 | 1 | R → G in SIALIDOSIS; type 2; affects substrate binding or catalysis. Ref.17 | VAR_018077 | |||||
| Natural variant | 363 | 1 | L → P in SIALIDOSIS; infantile type 2; unable to reach the lysosomes. Ref.3 Ref.12 Ref.13 Ref.15 | VAR_012224 | |||||
| Natural variant | 370 | 1 | Y → C in SIALIDOSIS; infantile type 2; catalytically inactive. Ref.13 | VAR_012225 | |||||
| Natural variant | 400 | 1 | Y → YHY in SIALIDOSIS; type 1; mild mutation as residual activity is still measurable. | VAR_012226 | |||||
Experimental info | |||||||||
| Mutagenesis | 412 | 1 | Y → A: Correct sorting to the plasma membrane but no endocytosis and internalization. Ref.9 | ||||||
| Mutagenesis | 413 | 1 | G → A: Correct sorting to the plasma membrane but no endocytosis and internalization. Ref.9 | ||||||
| Mutagenesis | 415 | 1 | L → A: Correct sorting to the plasma membrane but no endocytosis and internalization. Ref.9 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Characterization of human lysosomal neuraminidase defines the molecular basis of the metabolic storage disorder sialidosis." Bonten E.J., van der Spoel A., Fornerod M., Grosveld G., d'Azzo A. Genes Dev. 10:3156-3169(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], VARIANT TYPE II SIALIDOSIS ARG-91. Tissue: Fibroblast. |
| [2] | "Identification of a sialidase encoded in the human major histocompatibility complex." Milner C.M., Smith S.V., Carrillo M.B., Taylor G.L., Hollinshead M., Campbell R.D. J. Biol. Chem. 272:4549-4558(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Tissue: Monocyte. |
| [3] | "Cloning, expression and chromosomal mapping of human lysosomal sialidase and characterization of mutations in sialidosis." Pshezhetsky A.V., Richard C., Michaud L., Igdoura S.A., Wang S., Elsliger M.-A., Ou J., Leclerc D., Gravel R.A., Dallaire L., Potier M. Nat. Genet. 15:316-320(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], VARIANTS SIALIDOSIS TYR-260 AND PRO-363. Tissue: Fibroblast. |
| [4] | "Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse." Xie T., Rowen L., Aguado B., Ahearn M.E., Madan A., Qin S., Campbell R.D., Hood L. Genome Res. 13:2621-2636(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "Homo sapiens 2,229,817bp genomic DNA of 6p21.3 HLA class I region." Shiina S., Tamiya G., Oka A., Inoko H. Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "Cloning of human full-length CDSs in BD Creator(TM) system donor vector." Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., Phelan M., Farmer A. Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [7] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain and Kidney. |
| [8] | "Molecular mechanism of lysosomal sialidase deficiency in galactosialidosis involves its rapid degradation." Vinogradova M.V., Michaud L., Mezentsev A.V., Lukong K.E., El-Alfy M., Morales C.R., Potier M., Pshezhetsky A.V. Biochem. J. 330:641-650(1998) [PubMed] [Europe PMC] [Abstract] Cited for: PROTEIN SEQUENCE OF 48-55, GLYCOSYLATION. Tissue: Placenta. |
| [9] | "Intracellular distribution of lysosomal sialidase is controlled by the internalization signal in its cytoplasmic tail." Lukong K.E., Seyrantepe V., Landry K., Trudel S., Ahmad A., Gahl W.A., Lefrancois S., Morales C.R., Pshezhetsky A.V. J. Biol. Chem. 276:46172-46181(2001) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION, MUTAGENESIS OF TYR-412; GLY-413 AND LEU-415. |
| [10] | "Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry." Chen R., Jiang X., Sun D., Han G., Wang F., Ye M., Wang L., Zou H. J. Proteome Res. 8:651-661(2009) [PubMed] [Europe PMC] [Abstract] Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-352, MASS SPECTROMETRY. Tissue: Liver. |
| [11] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [12] | "Characterization of the sialidase molecular defects in sialidosis patients suggests the structural organization of the lysosomal multienzyme complex." Lukong K.E., Elsliger M.-A., Chang Y., Richard C., Thomas G., Carey W., Tylki-Szymanska A., Czartoryska B., Buchholz T., Rodriguez Criado G., Palmeri S., Pshezhetsky A.V. Hum. Mol. Genet. 9:1075-1085(2000) [PubMed] [Europe PMC] [Abstract] Cited for: CHARACTERIZATION OF VARIANTS SIALIDOSIS VAL-68; GLY-182; ARG-227; TYR-260; PHE-270; VAL-298; SER-328 AND PRO-363. |
| [13] | "Novel mutations in lysosomal neuraminidase identify functional domains and determine clinical severity in sialidosis." Bonten E.J., Arts W.F., Beck M., Covanis A., Donati M.A., Parini R., Zammarchi E., d'Azzo A. Hum. Mol. Genet. 9:2715-2725(2000) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS SIALIDOSIS MET-54; VAL-68; ARG-91; GLY-182; ALA-219; ARG-227; HIS-231; TYR-260; PRO-270; SER-294; VAL-298; SER-328; GLN-335; PRO-363; CYS-370 AND HIS-TYR-400 INS. |
| [14] | "Molecular and structural studies of Japanese patients with sialidosis type 1." Naganawa Y., Itoh K., Shimmoto M., Takiguchi K., Doi H., Nishizawa Y., Kobayashi T., Kamei S., Lukong K.E., Pshezhetsky A.V., Sakuraba H. J. Hum. Genet. 45:241-249(2000) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS SIALIDOSIS MET-217 AND ARG-243, CHARACTERIZATION OF VARIANTS SIALIDOSIS MET-217 AND ARG-243. |
| [15] | "Mutations in sialidosis impair sialidase binding to the lysosomal multienzyme complex." Lukong K.E., Landry K., Elsliger M.-A., Chang Y., Lefrancois S., Morales C.R., Pshezhetsky A.V. J. Biol. Chem. 276:17286-17290(2001) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS SIALIDOSIS VAL-68; GLY-182; ARG-227; ARG-240; TYR-260; PHE-270; VAL-298; SER-328 AND PRO-363, CHARACTERIZATION OF VARIANTS SIALIDOSIS VAL-68; GLY-182; ARG-227; TYR-260; PHE-270; VAL-298; SER-328 AND PRO-363. |
| [16] | "Novel missense mutations in the human lysosomal sialidase gene in sialidosis patients and prediction of structural alterations of mutant enzymes." Itoh K., Naganawa Y., Matsuzawa F., Aikawa S., Doi H., Sasagasako N., Yamada T., Kira J., Kobayashi T., Pshezhetsky A.V., Sakuraba H. J. Hum. Genet. 47:29-37(2002) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS SIALIDOSIS LEU-80; ARG-240 AND SER-316. |
| [17] | "Five novel mutations in the lysosomal sialidase gene (NEU1) in type II sialidosis patients and assessment of their impact on enzyme activity and intracellular targeting using adenovirus-mediated expression." Pattison S., Pankarican M., Rupar C.A., Graham F.L., Igdoura S.A. Hum. Mutat. 23:32-39(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS SIALIDOSIS PRO-225; VAL-298 AND GLY-341, CHARACTERIZATION OF VARIANTS SIALIDOSIS PRO-225; VAL-298 AND GLY-341. |
| + | Additional computationally mapped references. |
Web resources
| GeneReviews |
| Wikipedia Neuraminidase entry |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF040958 mRNA. Translation: AAB96774.1. X78687 mRNA. Translation: CAA55356.1. U84246 mRNA. Translation: AAD09239.1. AF134726 Genomic DNA. Translation: AAD21814.1. BA000025 Genomic DNA. Translation: BAB63297.1. BT007206 mRNA. Translation: AAP35870.1. BC000722 mRNA. Translation: AAH00722.1. BC011900 mRNA. Translation: AAH11900.1. |
| IPI | IPI00029817. |
| RefSeq | NP_000425.1. NM_000434.3. |
| UniGene | Hs.520037. |
3D structure databases | |
| ProteinModelPortal | Q99519. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q99519. 5 interactions. |
| MINT | MINT-1389413. |
| STRING | 9606.ENSP00000399309. |
Protein family/group databases | |
| CAZy | GH33. Glycoside Hydrolase Family 33. |
PTM databases | |
| PhosphoSite | Q99519. |
Polymorphism databases | |
| DMDM | 17368612. |
Proteomic databases | |
| PaxDb | Q99519. |
| PeptideAtlas | Q99519. |
| PRIDE | Q99519. |
Protocols and materials databases | |
| DNASU | 4758. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000229725; ENSP00000229725; ENSG00000184494. ENST00000375631; ENSP00000364782; ENSG00000204386. ENST00000411774; ENSP00000399309; ENSG00000234846. ENST00000422978; ENSP00000408957; ENSG00000227129. ENST00000423382; ENSP00000401067; ENSG00000228691. ENST00000434496; ENSP00000409489; ENSG00000234343. ENST00000437432; ENSP00000403720; ENSG00000223957. ENST00000439648; ENSP00000408207; ENSG00000227315. |
| GeneID | 4758. |
| KEGG | hsa:4758. |
| UCSC | uc003nxq.4. human. |
Organism-specific databases | |
| CTD | 4758. |
| GeneCards | GC06M031825. |
| HGNC | HGNC:7758. NEU1. |
| HPA | HPA015634. HPA021506. |
| MIM | 256550. phenotype. 608272. gene. |
| neXtProt | NX_Q99519. |
| Orphanet | 93400. Congenital sialidosis type 2. 93399. Juvenile sialidosis type 2. 812. Sialidosis type 1. |
| PharmGKB | PA31560. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG4409. |
| HOGENOM | HOG000007651. |
| HOVERGEN | HBG057314. |
| InParanoid | Q99519. |
| KO | K01186. |
| OMA | YEKGRNQ. |
| OrthoDB | EOG4DJJWX. |
| PhylomeDB | Q99519. |
Enzyme and pathway databases | |
| BRENDA | 3.2.1.18. 2681. |
| Reactome | REACT_111217. Metabolism. |
Gene expression databases | |
| ArrayExpress | Q99519. |
| Bgee | Q99519. |
| CleanEx | HS_NEU1. |
| Genevestigator | Q99519. |
| GermOnline | ENSG00000204386. Homo sapiens. |
Family and domain databases | |
| Gene3D | 2.120.10.10. 1 hit. |
| InterPro | IPR026942. Sialidase-1. IPR026856. Sialidase_fam. IPR011040. Sialidases. [Graphical view] |
| PANTHER | PTHR10628. PTHR10628. 1 hit. PTHR10628:SF9. PTHR10628:SF9. 1 hit. |
| SUPFAM | SSF50939. Sialidase. 1 hit. |
| ProtoNet | Search... |
Other | |
| BindingDB | Q99519. |
| ChEMBL | CHEMBL2726. |
| ChiTaRS | NEU1. human. |
| DrugBank | DB00198. Oseltamivir. DB00558. Zanamivir. |
| GenomeRNAi | 4758. |
| NextBio | 18328. |
| SOURCE | Search... |
Entry information
| Entry name | NEUR1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q99519 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Glycosyl hydrolases Classification of glycosyl hydrolase families and list of entries |
| Human chromosome 6 Human chromosome 6: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
