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Protein

Non-structural protein 6

Gene
N/A
Organism
Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8]) (RV-A)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein 6UniRule annotation
Short name:
NSP6UniRule annotation
OrganismiRotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8]) (RV-A)
Taxonomic identifieri10962 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirusRotavirus A
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000006581 Componenti: Genome

Subcellular locationi

  • Host cytoplasm UniRule annotation
  • Host mitochondrion UniRule annotation
  • Note: Found in spherical cytoplasmic structures, called viral factories, that appear early after infection and are the site of viral replication and packaging.UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Host cytoplasm, Host mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003695251 – 92Non-structural protein 6Add BLAST92

Interactioni

Subunit structurei

Interacts with NSP2 and NSP5.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the rotavirus A NSP6 family.UniRule annotation

Phylogenomic databases

OrthoDBiVOG090001DO

Family and domain databases

HAMAPiMF_04093 ROTA_NSP6, 1 hit
InterProiView protein in InterPro
IPR006950 Rotavirus_NSP6
PfamiView protein in Pfam
PF04866 Rota_NS6, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD008065 Rota_NS6, 1 hit

Sequencei

Sequence statusi: Complete.

Q993T1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRLLQRQLF LENLLVGTNS MFHQISKHSI NTCCRSLQRI LDHLILLQTI
60 70 80 90
HSPVFRLDRM QLRQMQMLAC LWIHQHNHDL QATLGAIKWI SP
Length:92
Mass (Da):10,909
Last modified:June 1, 2001 - v1
Checksum:iEEB2FBF272BCE7BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF306494 Genomic RNA Translation: AAK15270.1

Similar proteinsi

Entry informationi

Entry nameiNSP6_ROTHW
AccessioniPrimary (citable) accession number: Q993T1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: June 1, 2001
Last modified: April 25, 2018
This is version 32 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health