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Q992J0

- RDRP_BOOLV

UniProt

Q992J0 - RDRP_BOOLV

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Protein

RNA-directed RNA polymerase

Gene
N/A
Organism
Boolarra virus (BoV)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

RNA-dependent RNA polymerase which replicates the viral genome composed of 2 RNA segments, RNA1 AND RNA2 Reviewed prediction.

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).

GO - Molecular functioni

  1. RNA-directed RNA polymerase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Nucleotidyltransferase, RNA-directed RNA polymerase, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
RNA-directed RNA polymerase (EC:2.7.7.48)
Short name:
RdRp
Alternative name(s):
RNA replicase
Short name:
Protein A
OrganismiBoolarra virus (BoV)
Taxonomic identifieri12286 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageNodaviridaeAlphanodavirus
Virus hostiHepialidae (ghost moths) [TaxID: 41021]

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 998998RNA-directed RNA polymerasePRO_0000222445Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ992J0.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR020237. RNA-dir_pol_C_nodavirus.
[Graphical view]
ProDomiPD029982. RNA-dir_pol_nodavirus. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Q992J0-1 [UniParc]FASTAAdd to Basket

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MTIKIILGEH QITRTELLGG IVIVSGCGAV AYCISKFWGY GAIAPYPQSG    50
GNRVTRALQR AVIDKTKTPI KTHFYPLDSL RTVTPRRASD NGHAVSGAVR 100
DAARRLINES IETVGGSKFE LNPNPNSTMG PRNHFHFAVG DLAQNFRDDQ 150
PAADAFIVGV DVDYYITEPD VLLEHMRPLV LHTFNPKKVS GFDADSPFTI 200
NNNLVEYKVS GGAAWVHPVW DWCEAGEFIA SRVRSSWFEW LLQLPLRCLG 250
LERVGYHKIH HCRPWTDCPD RALVYTIPQH TVWRFTWIDT EIHTRKLKRI 300
TYQDNTKPGW NRLEHVSDNN QLLVSIGREG EHMQITIEKD KLEMLSGLGA 350
TQSVNARLIG MGHKDPLYTS MIVQYYTGKK VVLSVAPTVY RPTMPRVHWP 400
VTSDADVPEV SARQYTKPII SDCMMMPMIK RWETMSESIE RRVTFVANNK 450
KPSDAVAKIA AEFVSLMNGP FIDLEPLTIE ETVERLNKPS QQLQLRAVFE 500
IMGVEPRQVI ESFNKNEPGM KSSRIISAFP DILFIVKVSR YTLAYSDAVL 550
HAEHNQHWYY PGRTPVGITD GVCEFVSDCD GQVIETDFSN LDGRVSGWMQ 600
RNIAQKAMVQ AFRAEYRDEI ISFMDTIINC PAKAKRFGFR YEPGMGVKSG 650
SPTTTPHNTQ YNACVEYTAL KFEYPDANPE DLFSLLGPKC GDDGLARATI 700
QKTINRAAKC YGLELKVEKY NPEVGLCFLS RVFVDPLNTP TTIQDPLRTL 750
RKLHITTRDP TIPIADAACD RVEGYLCTDA HTPLISEYCR MVQRLYGPKT 800
STRDVREARR SRNKEKPYWL TCDGSWPQHP QDALLMKQIV VSRTGIDEDT 850
VDKLIGRFAA MKDVWEPITL ESEESKAAQT IDEEGVAPGS VDESLLKLND 900
AKQTRSNSGT SGPHTKGGGS GTGNELPRST KQRAKGPRQS AGLPKQGKAN 950
SKPNGNVAAG QAQHGGIPRG KTPSGGKTNA RRAPPKAGAQ PGAPTNPK 998
Length:998
Mass (Da):111,204
Last modified:June 1, 2001 - v1
Checksum:i7FAFFE4FC7329253
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF329080 Genomic RNA. Translation: AAK15751.1.
RefSeqiNP_689439.1. NC_004142.1.

Genome annotation databases

GeneIDi956656.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF329080 Genomic RNA. Translation: AAK15751.1 .
RefSeqi NP_689439.1. NC_004142.1.

3D structure databases

ProteinModelPortali Q992J0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 956656.

Family and domain databases

InterProi IPR020237. RNA-dir_pol_C_nodavirus.
[Graphical view ]
ProDomi PD029982. RNA-dir_pol_nodavirus. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

  1. "Comparisons among the larger genome segments of six nodaviruses and their encoded RNA replicases."
    Johnson K.N., Johnson K.L., Dasgupta R., Gratsch T., Ball L.A.
    J. Gen. Virol. 82:1855-1866(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiRDRP_BOOLV
AccessioniPrimary (citable) accession number: Q992J0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 16, 2002
Last sequence update: June 1, 2001
Last modified: April 16, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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