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Q992J0

- RDRP_BOOLV

UniProt

Q992J0 - RDRP_BOOLV

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Protein

RNA-directed RNA polymerase

Gene
N/A
Organism
Boolarra virus (BoV)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

RNA-dependent RNA polymerase which replicates the viral genome composed of 2 RNA segments, RNA1 AND RNA2.Curated

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).

GO - Molecular functioni

  1. RNA-directed RNA polymerase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Nucleotidyltransferase, RNA-directed RNA polymerase, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
RNA-directed RNA polymerase (EC:2.7.7.48)
Short name:
RdRp
Alternative name(s):
RNA replicase
Short name:
Protein A
OrganismiBoolarra virus (BoV)
Taxonomic identifieri12286 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageNodaviridaeAlphanodavirus
Virus hostiHepialidae (ghost moths) [TaxID: 41021]

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 998998RNA-directed RNA polymerasePRO_0000222445Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ992J0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the nodaviridae RNA polymerase family.Curated

Family and domain databases

InterProiIPR020237. RNA-dir_pol_C_nodavirus.
[Graphical view]
ProDomiPD029982. RNA-dir_pol_nodavirus. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Q992J0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTIKIILGEH QITRTELLGG IVIVSGCGAV AYCISKFWGY GAIAPYPQSG
60 70 80 90 100
GNRVTRALQR AVIDKTKTPI KTHFYPLDSL RTVTPRRASD NGHAVSGAVR
110 120 130 140 150
DAARRLINES IETVGGSKFE LNPNPNSTMG PRNHFHFAVG DLAQNFRDDQ
160 170 180 190 200
PAADAFIVGV DVDYYITEPD VLLEHMRPLV LHTFNPKKVS GFDADSPFTI
210 220 230 240 250
NNNLVEYKVS GGAAWVHPVW DWCEAGEFIA SRVRSSWFEW LLQLPLRCLG
260 270 280 290 300
LERVGYHKIH HCRPWTDCPD RALVYTIPQH TVWRFTWIDT EIHTRKLKRI
310 320 330 340 350
TYQDNTKPGW NRLEHVSDNN QLLVSIGREG EHMQITIEKD KLEMLSGLGA
360 370 380 390 400
TQSVNARLIG MGHKDPLYTS MIVQYYTGKK VVLSVAPTVY RPTMPRVHWP
410 420 430 440 450
VTSDADVPEV SARQYTKPII SDCMMMPMIK RWETMSESIE RRVTFVANNK
460 470 480 490 500
KPSDAVAKIA AEFVSLMNGP FIDLEPLTIE ETVERLNKPS QQLQLRAVFE
510 520 530 540 550
IMGVEPRQVI ESFNKNEPGM KSSRIISAFP DILFIVKVSR YTLAYSDAVL
560 570 580 590 600
HAEHNQHWYY PGRTPVGITD GVCEFVSDCD GQVIETDFSN LDGRVSGWMQ
610 620 630 640 650
RNIAQKAMVQ AFRAEYRDEI ISFMDTIINC PAKAKRFGFR YEPGMGVKSG
660 670 680 690 700
SPTTTPHNTQ YNACVEYTAL KFEYPDANPE DLFSLLGPKC GDDGLARATI
710 720 730 740 750
QKTINRAAKC YGLELKVEKY NPEVGLCFLS RVFVDPLNTP TTIQDPLRTL
760 770 780 790 800
RKLHITTRDP TIPIADAACD RVEGYLCTDA HTPLISEYCR MVQRLYGPKT
810 820 830 840 850
STRDVREARR SRNKEKPYWL TCDGSWPQHP QDALLMKQIV VSRTGIDEDT
860 870 880 890 900
VDKLIGRFAA MKDVWEPITL ESEESKAAQT IDEEGVAPGS VDESLLKLND
910 920 930 940 950
AKQTRSNSGT SGPHTKGGGS GTGNELPRST KQRAKGPRQS AGLPKQGKAN
960 970 980 990
SKPNGNVAAG QAQHGGIPRG KTPSGGKTNA RRAPPKAGAQ PGAPTNPK
Length:998
Mass (Da):111,204
Last modified:June 1, 2001 - v1
Checksum:i7FAFFE4FC7329253
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF329080 Genomic RNA. Translation: AAK15751.1.
RefSeqiNP_689439.1. NC_004142.1.

Genome annotation databases

GeneIDi956656.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF329080 Genomic RNA. Translation: AAK15751.1 .
RefSeqi NP_689439.1. NC_004142.1.

3D structure databases

ProteinModelPortali Q992J0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 956656.

Family and domain databases

InterProi IPR020237. RNA-dir_pol_C_nodavirus.
[Graphical view ]
ProDomi PD029982. RNA-dir_pol_nodavirus. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

  1. "Comparisons among the larger genome segments of six nodaviruses and their encoded RNA replicases."
    Johnson K.N., Johnson K.L., Dasgupta R., Gratsch T., Ball L.A.
    J. Gen. Virol. 82:1855-1866(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiRDRP_BOOLV
AccessioniPrimary (citable) accession number: Q992J0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 16, 2002
Last sequence update: June 1, 2001
Last modified: October 1, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3