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Q992J0

- RDRP_BOOLV

UniProt

Q992J0 - RDRP_BOOLV

Protein

RNA-directed RNA polymerase

Gene
N/A
Organism
Boolarra virus (BoV)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (01 Jun 2001)
      Previous versions | rss
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    Functioni

    RNA-dependent RNA polymerase which replicates the viral genome composed of 2 RNA segments, RNA1 AND RNA2.Curated

    Catalytic activityi

    Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).

    GO - Molecular functioni

    1. RNA-directed RNA polymerase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Nucleotidyltransferase, RNA-directed RNA polymerase, Transferase

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    RNA-directed RNA polymerase (EC:2.7.7.48)
    Short name:
    RdRp
    Alternative name(s):
    RNA replicase
    Short name:
    Protein A
    OrganismiBoolarra virus (BoV)
    Taxonomic identifieri12286 [NCBI]
    Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageNodaviridaeAlphanodavirus
    Virus hostiHepialidae (ghost moths) [TaxID: 41021]

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 998998RNA-directed RNA polymerasePRO_0000222445Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliQ992J0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the nodaviridae RNA polymerase family.Curated

    Family and domain databases

    InterProiIPR020237. RNA-dir_pol_C_nodavirus.
    [Graphical view]
    ProDomiPD029982. RNA-dir_pol_nodavirus. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    Q992J0-1 [UniParc]FASTAAdd to Basket

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    MTIKIILGEH QITRTELLGG IVIVSGCGAV AYCISKFWGY GAIAPYPQSG    50
    GNRVTRALQR AVIDKTKTPI KTHFYPLDSL RTVTPRRASD NGHAVSGAVR 100
    DAARRLINES IETVGGSKFE LNPNPNSTMG PRNHFHFAVG DLAQNFRDDQ 150
    PAADAFIVGV DVDYYITEPD VLLEHMRPLV LHTFNPKKVS GFDADSPFTI 200
    NNNLVEYKVS GGAAWVHPVW DWCEAGEFIA SRVRSSWFEW LLQLPLRCLG 250
    LERVGYHKIH HCRPWTDCPD RALVYTIPQH TVWRFTWIDT EIHTRKLKRI 300
    TYQDNTKPGW NRLEHVSDNN QLLVSIGREG EHMQITIEKD KLEMLSGLGA 350
    TQSVNARLIG MGHKDPLYTS MIVQYYTGKK VVLSVAPTVY RPTMPRVHWP 400
    VTSDADVPEV SARQYTKPII SDCMMMPMIK RWETMSESIE RRVTFVANNK 450
    KPSDAVAKIA AEFVSLMNGP FIDLEPLTIE ETVERLNKPS QQLQLRAVFE 500
    IMGVEPRQVI ESFNKNEPGM KSSRIISAFP DILFIVKVSR YTLAYSDAVL 550
    HAEHNQHWYY PGRTPVGITD GVCEFVSDCD GQVIETDFSN LDGRVSGWMQ 600
    RNIAQKAMVQ AFRAEYRDEI ISFMDTIINC PAKAKRFGFR YEPGMGVKSG 650
    SPTTTPHNTQ YNACVEYTAL KFEYPDANPE DLFSLLGPKC GDDGLARATI 700
    QKTINRAAKC YGLELKVEKY NPEVGLCFLS RVFVDPLNTP TTIQDPLRTL 750
    RKLHITTRDP TIPIADAACD RVEGYLCTDA HTPLISEYCR MVQRLYGPKT 800
    STRDVREARR SRNKEKPYWL TCDGSWPQHP QDALLMKQIV VSRTGIDEDT 850
    VDKLIGRFAA MKDVWEPITL ESEESKAAQT IDEEGVAPGS VDESLLKLND 900
    AKQTRSNSGT SGPHTKGGGS GTGNELPRST KQRAKGPRQS AGLPKQGKAN 950
    SKPNGNVAAG QAQHGGIPRG KTPSGGKTNA RRAPPKAGAQ PGAPTNPK 998
    Length:998
    Mass (Da):111,204
    Last modified:June 1, 2001 - v1
    Checksum:i7FAFFE4FC7329253
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF329080 Genomic RNA. Translation: AAK15751.1.
    RefSeqiNP_689439.1. NC_004142.1.

    Genome annotation databases

    GeneIDi956656.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF329080 Genomic RNA. Translation: AAK15751.1 .
    RefSeqi NP_689439.1. NC_004142.1.

    3D structure databases

    ProteinModelPortali Q992J0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 956656.

    Family and domain databases

    InterProi IPR020237. RNA-dir_pol_C_nodavirus.
    [Graphical view ]
    ProDomi PD029982. RNA-dir_pol_nodavirus. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparisons among the larger genome segments of six nodaviruses and their encoded RNA replicases."
      Johnson K.N., Johnson K.L., Dasgupta R., Gratsch T., Ball L.A.
      J. Gen. Virol. 82:1855-1866(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

    Entry informationi

    Entry nameiRDRP_BOOLV
    AccessioniPrimary (citable) accession number: Q992J0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 16, 2002
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3