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Q98SV0

- SELPB_DANRE

UniProt

Q98SV0 - SELPB_DANRE

Protein

Selenoprotein Pb

Gene

sepp1b

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 3 (26 Feb 2008)
      Previous versions | rss
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    Functioni

    Might be responsible for some of the extracellular antioxidant defense properties of selenium.By similarity

    GO - Molecular functioni

    1. selenium binding Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Selenoprotein Pb
    Short name:
    zSelPb
    Gene namesi
    Name:sepp1b
    OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
    Taxonomic identifieri7955 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
    ProteomesiUP000000437: Unplaced

    Organism-specific databases

    ZFINiZDB-GENE-030311-2. sepp1b.

    Subcellular locationi

    Secreted By similarity

    GO - Cellular componenti

    1. extracellular region Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 1818Sequence AnalysisAdd
    BLAST
    Chaini19 – 265247Selenoprotein PbPRO_0000022301Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi28 – 281N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi88 – 881N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi178 – 1781N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi184 – 1841N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi207 – 2071N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi216 – 26449His-richAdd
    BLAST

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiNOG78314.
    HOVERGENiHBG056814.
    PhylomeDBiQ98SV0.

    Family and domain databases

    Gene3Di3.40.30.10. 1 hit.
    InterProiIPR007671. Selenoprotein-P_N.
    IPR012336. Thioredoxin-like_fold.
    [Graphical view]
    PfamiPF04592. SelP_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF52833. SSF52833. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q98SV0-1 [UniParc]FASTAAdd to Basket

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    MQALWPLLLS ALPALLGASS LFVEKESNGS RICKPAPQWE IDGKTPMKEL    50
    LGNVVVVALL KASUHFCLTQ AARLGDLRDK LANGGLTNIS FMVVNEQDSQ 100
    SRAMYWELKR RTAQDIPVYQ QSPLQNDVWE ILEGDKDDFL VYDRCGYLTF 150
    HIVLPFSFLH YPYIEAAIRA TYHKNMCNCS LNANFSISES SDSTKNDPAG 200
    ENNQRPNSTE PVTAAHHHHH QQHEPHHHHH NPYPNSHKKS GDSDVTGKPK 250
    EPPHHSHQEH VHNHR 265
    Length:265
    Mass (Da):30,040
    Last modified:February 26, 2008 - v3
    Checksum:iD858FC5CD7EDEB13
    GO

    Non-standard residue

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-standard residuei64 – 641Selenocysteine1 Publication

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF322072 mRNA. Translation: AAG53689.1.
    UniGeneiDr.8516.

    Keywords - Coding sequence diversityi

    Selenocysteine

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF322072 mRNA. Translation: AAG53689.1 .
    UniGenei Dr.8516.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    ZFINi ZDB-GENE-030311-2. sepp1b.

    Phylogenomic databases

    eggNOGi NOG78314.
    HOVERGENi HBG056814.
    PhylomeDBi Q98SV0.

    Family and domain databases

    Gene3Di 3.40.30.10. 1 hit.
    InterProi IPR007671. Selenoprotein-P_N.
    IPR012336. Thioredoxin-like_fold.
    [Graphical view ]
    Pfami PF04592. SelP_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52833. SSF52833. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Selenium metabolism in zebrafish: multiplicity of selenoprotein genes and expression of a protein containing 17 selenocysteine residues."
      Kryukov G.V., Gladyshev V.N.
      Genes Cells 5:1049-1060(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].

    Entry informationi

    Entry nameiSELPB_DANRE
    AccessioniPrimary (citable) accession number: Q98SV0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 11, 2003
    Last sequence update: February 26, 2008
    Last modified: October 1, 2014
    This is version 69 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    External Data

    Dasty 3