Q98QU2 (ATPD_MYCPU) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
ATP synthase subunit delta

Alternative name(s):
ATP synthase F(1) sector subunit delta
F-type ATPase subunit delta
Short name=F-ATPase subunit delta

Gene names

Name:	atpH
Ordered Locus Names:	MYPU_2690

Organism

Mycoplasma pulmonis (strain UAB CTIP) [Complete proteome] [HAMAP]

Taxonomic identifier

272635 [NCBI]

Taxonomic lineage

Bacteria › Tenericutes › Mollicutes › Mycoplasmataceae › Mycoplasma

Protein attributes

Sequence length	179 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	F1F0 ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core and F0 containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proton translocation By similarity. HAMAP MF_01416 This protein is part of the stalk that links CF0 to CF1. It either transmits conformational changes from CF0 to CF1 or is implicated in proton conduction By similarity. HAMAP MF_01416
Subunit structure	F-type ATPases have 2 components, F1 - the catalytic core - and F0 - the membrane proton channel. F1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. F0 has three main subunits: a1, b2 and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F1 is attached to F0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains By similarity.
Subcellular location	Cell membrane; Peripheral membrane protein By similarity HAMAP MF_01416.
Sequence similarities	Belongs to the ATPase delta chain family.

Ontologies

Keywords
Biological process	ATP synthesis Hydrogen ion transport Ion transport Transport
Cellular component	CF(1) Cell membrane Membrane
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	ATP synthesis coupled proton transport Inferred from electronic annotation. Source: InterPro
Cellular component	plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell proton-transporting ATP synthase complex, catalytic core F(1) Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	hydrogen ion transporting ATP synthase activity, rotational mechanism Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 179	179	ATP synthase subunit delta HAMAP MF_01416		PRO_0000193470

Sequences

	Sequence		Length	Mass (Da)
	Q98QU2 [UniParc]. Last modified October 1, 2001. Version 1. Checksum: B767478054E6A8C4	FASTA	179	20,790
	10 20 30 40 50 60 MIDNHYVQSS AKALSQIAFE EKKEKLFLNQ LFIIKNIFSY NPEVVEYLAS GSIKLENKKK 70 80 90 100 110 120 FIEEIFDLIE PLILNFLLMA VEDNKIKYLD NIFLKAILTI NKKLNIENGI IYTTLKLSDK 130 140 150 160 170 KLLEIEKKLS VFLKKEVKLL NLIDKELISG YEIQVGDFKQ RNNVASWIDQ MALSIKKGD

References

[1]

"The complete genome sequence of the murine respiratory pathogen Mycoplasma pulmonis." Chambaud I., Heilig R., Ferris S., Barbe V., Samson D., Galisson F., Moszer I., Dybvig K., Wroblewski H., Viari A., Rocha E.P.C., Blanchard A. Nucleic Acids Res. 29:2145-2153(2001) [PubMed: 11353084] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: UAB CTIP.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL445563 Genomic DNA. Translation: CAC13442.1.
PIR	E90545.
RefSeq	NP_326100.1. NC_002771.1.
3D structure databases
ProteinModelPortal	Q98QU2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	911354.
GenomeReviews	Gene locus MYPU_2690 in contig AL445566_GR.
KEGG	mpu:MYPU_2690.
PATRIC	20023430. VBIMycPul29704_0272.
Organism-specific databases
GenoList	MYPU_2690.
CMR	Search...
Phylogenomic databases
PhylomeDB	Q98QU2.
Enzyme and pathway databases
BioCyc	MPUL272635:MYPU_2690-MONOMER.
Family and domain databases
HAMAP	MF_01416. ATP_synth_delta_bact. [Tree]
InterPro	IPR000711. ATPase_F1-cplx_OSCP/dsu. IPR020781. ATPase_F1-cplx_OSCP/dsu_CS. [Graphical view]
Gene3D	G3DSA:1.10.520.20. ATPase_F1_OSCP/d. 1 hit.
KO	K02113.
Pfam	PF00213. OSCP. 1 hit. [Graphical view]
PRINTS	PR00125. ATPASEDELTA.
SUPFAM	SSF47928. ATPsynt_OSCP. 1 hit.
TIGRFAMs	TIGR01145. ATP_synt_delta. 1 hit.
PROSITE	PS00389. ATPASE_DELTA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

ATPD_MYCPU

Accession

Primary (citable) accession number: Q98QU2

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 24, 2001
Last sequence update:	October 1, 2001
Last modified:	January 25, 2012
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program