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Protein
Submitted name:

DNA ligase homolog

Gene

mlr9524

Organism
Rhizobium loti (strain MAFF303099) (Mesorhizobium loti)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMLOT266835:GJ9L-7144-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase homologImported
Gene namesi
Ordered Locus Names:mlr9524Imported
Encoded oniPlasmid pMLbImported
OrganismiRhizobium loti (strain MAFF303099) (Mesorhizobium loti)Imported
Taxonomic identifieri266835 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
ProteomesiUP000000552: Plasmid pMLb

Interactioni

Protein-protein interaction databases

STRINGi266835.mlr9524.

Structurei

3D structure databases

ProteinModelPortaliQ98PC0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
OMAiTIDANPA.
OrthoDBiEOG60919Q.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q98PC0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLKFVAPLM PTLVEKPPEG DAWIHEVKFD GYRSQLIIDE DGTRIYTRNG
60 70 80 90 100
HDWTAKYSDL VQEAKSLGAE SAIIDGEIIV LNEAGLSDFG ELRKAITHRQ
110 120 130 140 150
HDLYFVAFDL LHLNGFDLRD MALKDRRAGL YAIIPPGLRI QFSDALPGDA
160 170 180 190 200
KAIFELVDKA GLEGMVSKRK DSKYRSGNST AWLKIKAYTV DEYELLGVER
210 220 230 240 250
EAGKPAFALM ADRKTGRYVG SAFINSSRAI RERLWKRVQE HAGSPPKGMK
260 270 280
RPGTQWVKPG LIGRVKHLRG EEDLRHASLQ DFREE
Length:285
Mass (Da):32,206
Last modified:October 1, 2001 - v1
Checksum:i24B347AB78978D90
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003017 Genomic DNA. Translation: BAB54735.1.
RefSeqiNP_109396.1. NC_002682.1.

Genome annotation databases

EnsemblBacteriaiBAB54735; BAB54735; BAB54735.
GeneIDi1224368.
KEGGimlo:mlr9524.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003017 Genomic DNA. Translation: BAB54735.1.
RefSeqiNP_109396.1. NC_002682.1.

3D structure databases

ProteinModelPortaliQ98PC0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266835.mlr9524.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB54735; BAB54735; BAB54735.
GeneIDi1224368.
KEGGimlo:mlr9524.

Phylogenomic databases

HOGENOMiHOG000222509.
OMAiTIDANPA.
OrthoDBiEOG60919Q.

Enzyme and pathway databases

BioCyciMLOT266835:GJ9L-7144-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiQ98PC0_RHILO
AccessioniPrimary (citable) accession number: Q98PC0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: March 4, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.