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Q98P39

- Q98P39_RHILO

UniProt

Q98P39 - Q98P39_RHILO

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene
mll9625
Organism
Rhizobium loti (strain MAFF303099) (Mesorhizobium loti)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMLOT266835:GJ9L-7225-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:mll9625Imported
Encoded oniPlasmid pMLbImported
OrganismiRhizobium loti (strain MAFF303099) (Mesorhizobium loti)Imported
Taxonomic identifieri266835 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
ProteomesiUP000000552: Plasmid pMLb

Interactioni

Protein-protein interaction databases

STRINGi266835.mll9625.

Structurei

3D structure databases

ProteinModelPortaliQ98P39.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiRTETWAK.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q98P39-1 [UniParc]FASTAAdd to Basket

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MASDKLTTYK AKRDFKKTQE PSGQGSVKPS NRRRFVIQKH DATRLHYDLR    50
LELGGVFKSW AVTRGPSLDP HDKRLAVEVE DHPLDYGDFE GTIPKGQYGG 100
GTVMLWDRGY WEPEGKNSPE QALAKGDFKF TLEGERLHGS FVLVRMANDR 150
ERGKRTNWLL IKHRDEYAVE TNGAAILDKN DTSVASGRKM EAIAAGKGRS 200
PKPFMLQGGK AEADAVWDSR TGLAAQERKT NIRAKRKKHG TVTAADLPDF 250
IAPQLCQTLA RPPSESGWLH EIKFDGYRIQ MRVLGGEAIL QTRKGLDWTA 300
RYRAIARAAG NLPDAIIDGE ICALDENGAP DFAALQAALA EGKTDALVYF 350
AFDLLFEGAE DLRVLPLSKR KARLRQFLTD TGEDDRIRFV EHFETGGEAV 400
LRSACRLSLE GIVSKRADAP YVSGRTETWA KSKCRAGHEV VIGAYATTNG 450
KFRSLLVGVY RGDHFVYVGR VGTGYGAAKV RDLLPKLKAA ATRKSPFTGI 500
GAPKNEPGVV WLKPELVAEI EFAGWTSDGL VRQAAFKGLR EDKPAEEVEA 550
DKPASPEKTK VPQPREPTAA AKPSRSRGKV DVMGVLISNP DKPLWPDAND 600
GIPVTKEDLA RYYEAVGPWL IEHIRGRPCS IIRAPDGFGG EQFFQRHAMP 650
GTSNLLELVE VFGDKKPYLQ IDRVEGLAAV AQIGALELHP WNCEPQQPEV 700
PGRLVFDLDP GPDVPFKTVV EAAKEMRARL DDLGLVSFCK TTGGKGLHVV 750
TPLAVTKRSK LTWPEAKGFA HDVCLQMARD NPALYLTKMA KNQRIGRIFL 800
DYLRNDRMAT AVAPLSPRAR PGATVSMPLT WAQVKTDLDP KRFTLRTVPG 850
LLAKSTAWKD YGDGHRLLEA SIKRLARSMR RAA 883
Length:883
Mass (Da):97,530
Last modified:October 1, 2001 - v1
Checksum:iEB0DB180BF8A9CDC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP003017 Genomic DNA. Translation: BAB54816.1.
RefSeqiNP_109477.1. NC_002682.1.
WP_010916160.1. NC_002682.1.

Genome annotation databases

EnsemblBacteriaiBAB54816; BAB54816; BAB54816.
GeneIDi1224449.
KEGGimlo:mll9625.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP003017 Genomic DNA. Translation: BAB54816.1 .
RefSeqi NP_109477.1. NC_002682.1.
WP_010916160.1. NC_002682.1.

3D structure databases

ProteinModelPortali Q98P39.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266835.mll9625.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB54816 ; BAB54816 ; BAB54816 .
GeneIDi 1224449.
KEGGi mlo:mll9625.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi RTETWAK.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci MLOT266835:GJ9L-7225-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MAFF303099Imported.
    Plasmid: pMLb

Entry informationi

Entry nameiQ98P39_RHILO
AccessioniPrimary (citable) accession number: Q98P39
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: September 3, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported

External Data

Dasty 3

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