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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

mll9625

Organism
Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) (Mesorhizobium loti (strain MAFF 303099))
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciMLOT266835:G1G20-7368-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:mll9625Imported
Encoded oniPlasmid pMLbImported
OrganismiMesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) (Mesorhizobium loti (strain MAFF 303099))Imported
Taxonomic identifieri266835 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
Proteomesi
  • UP000000552 Componenti: Plasmid pMLb

Structurei

3D structure databases

ProteinModelPortaliQ98P39
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini340 – 477DNA_LIGASE_A3InterPro annotationAdd BLAST138

Phylogenomic databases

HOGENOMiHOG000222509
KOiK01971
OMAiWDFRLEL
OrthoDBiPOG091H0AZ9

Family and domain databases

CDDicd04862 PaeLigD_Pol_like, 1 hit
InterProiView protein in InterPro
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR014146 LigD_ligase_dom
IPR014144 LigD_PE_domain
IPR014145 LigD_pol_dom
IPR012340 NA-bd_OB-fold
IPR014143 NHEJ_ligase_prk
IPR033651 PaeLigD_Pol-like
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF13298 LigD_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR02777 LigD_PE_dom, 1 hit
TIGR02778 ligD_pol, 1 hit
TIGR02779 NHEJ_ligase_lig, 1 hit
TIGR02776 NHEJ_ligase_prk, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

Q98P39-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASDKLTTYK AKRDFKKTQE PSGQGSVKPS NRRRFVIQKH DATRLHYDLR
60 70 80 90 100
LELGGVFKSW AVTRGPSLDP HDKRLAVEVE DHPLDYGDFE GTIPKGQYGG
110 120 130 140 150
GTVMLWDRGY WEPEGKNSPE QALAKGDFKF TLEGERLHGS FVLVRMANDR
160 170 180 190 200
ERGKRTNWLL IKHRDEYAVE TNGAAILDKN DTSVASGRKM EAIAAGKGRS
210 220 230 240 250
PKPFMLQGGK AEADAVWDSR TGLAAQERKT NIRAKRKKHG TVTAADLPDF
260 270 280 290 300
IAPQLCQTLA RPPSESGWLH EIKFDGYRIQ MRVLGGEAIL QTRKGLDWTA
310 320 330 340 350
RYRAIARAAG NLPDAIIDGE ICALDENGAP DFAALQAALA EGKTDALVYF
360 370 380 390 400
AFDLLFEGAE DLRVLPLSKR KARLRQFLTD TGEDDRIRFV EHFETGGEAV
410 420 430 440 450
LRSACRLSLE GIVSKRADAP YVSGRTETWA KSKCRAGHEV VIGAYATTNG
460 470 480 490 500
KFRSLLVGVY RGDHFVYVGR VGTGYGAAKV RDLLPKLKAA ATRKSPFTGI
510 520 530 540 550
GAPKNEPGVV WLKPELVAEI EFAGWTSDGL VRQAAFKGLR EDKPAEEVEA
560 570 580 590 600
DKPASPEKTK VPQPREPTAA AKPSRSRGKV DVMGVLISNP DKPLWPDAND
610 620 630 640 650
GIPVTKEDLA RYYEAVGPWL IEHIRGRPCS IIRAPDGFGG EQFFQRHAMP
660 670 680 690 700
GTSNLLELVE VFGDKKPYLQ IDRVEGLAAV AQIGALELHP WNCEPQQPEV
710 720 730 740 750
PGRLVFDLDP GPDVPFKTVV EAAKEMRARL DDLGLVSFCK TTGGKGLHVV
760 770 780 790 800
TPLAVTKRSK LTWPEAKGFA HDVCLQMARD NPALYLTKMA KNQRIGRIFL
810 820 830 840 850
DYLRNDRMAT AVAPLSPRAR PGATVSMPLT WAQVKTDLDP KRFTLRTVPG
860 870 880
LLAKSTAWKD YGDGHRLLEA SIKRLARSMR RAA
Length:883
Mass (Da):97,530
Last modified:October 1, 2001 - v1
Checksum:iEB0DB180BF8A9CDC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003017 Genomic DNA Translation: BAB54816.1
RefSeqiWP_010916160.1, NC_002682.1

Genome annotation databases

EnsemblBacteriaiBAB54816; BAB54816; BAB54816
KEGGimlo:mll9625

Similar proteinsi

Entry informationi

Entry nameiQ98P39_RHILO
AccessioniPrimary (citable) accession number: Q98P39
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: May 23, 2018
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

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