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Q98P39

- Q98P39_RHILO

UniProt

Q98P39 - Q98P39_RHILO

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

mll9625

Organism
Rhizobium loti (strain MAFF303099) (Mesorhizobium loti)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 73 (01 Oct 2014)
      Sequence version 1 (01 Oct 2001)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMLOT266835:GJ9L-7225-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:mll9625Imported
    Encoded oniPlasmid pMLbImported
    OrganismiRhizobium loti (strain MAFF303099) (Mesorhizobium loti)Imported
    Taxonomic identifieri266835 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
    ProteomesiUP000000552: Plasmid pMLb

    Interactioni

    Protein-protein interaction databases

    STRINGi266835.mll9625.

    Structurei

    3D structure databases

    ProteinModelPortaliQ98P39.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiRTETWAK.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q98P39-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASDKLTTYK AKRDFKKTQE PSGQGSVKPS NRRRFVIQKH DATRLHYDLR    50
    LELGGVFKSW AVTRGPSLDP HDKRLAVEVE DHPLDYGDFE GTIPKGQYGG 100
    GTVMLWDRGY WEPEGKNSPE QALAKGDFKF TLEGERLHGS FVLVRMANDR 150
    ERGKRTNWLL IKHRDEYAVE TNGAAILDKN DTSVASGRKM EAIAAGKGRS 200
    PKPFMLQGGK AEADAVWDSR TGLAAQERKT NIRAKRKKHG TVTAADLPDF 250
    IAPQLCQTLA RPPSESGWLH EIKFDGYRIQ MRVLGGEAIL QTRKGLDWTA 300
    RYRAIARAAG NLPDAIIDGE ICALDENGAP DFAALQAALA EGKTDALVYF 350
    AFDLLFEGAE DLRVLPLSKR KARLRQFLTD TGEDDRIRFV EHFETGGEAV 400
    LRSACRLSLE GIVSKRADAP YVSGRTETWA KSKCRAGHEV VIGAYATTNG 450
    KFRSLLVGVY RGDHFVYVGR VGTGYGAAKV RDLLPKLKAA ATRKSPFTGI 500
    GAPKNEPGVV WLKPELVAEI EFAGWTSDGL VRQAAFKGLR EDKPAEEVEA 550
    DKPASPEKTK VPQPREPTAA AKPSRSRGKV DVMGVLISNP DKPLWPDAND 600
    GIPVTKEDLA RYYEAVGPWL IEHIRGRPCS IIRAPDGFGG EQFFQRHAMP 650
    GTSNLLELVE VFGDKKPYLQ IDRVEGLAAV AQIGALELHP WNCEPQQPEV 700
    PGRLVFDLDP GPDVPFKTVV EAAKEMRARL DDLGLVSFCK TTGGKGLHVV 750
    TPLAVTKRSK LTWPEAKGFA HDVCLQMARD NPALYLTKMA KNQRIGRIFL 800
    DYLRNDRMAT AVAPLSPRAR PGATVSMPLT WAQVKTDLDP KRFTLRTVPG 850
    LLAKSTAWKD YGDGHRLLEA SIKRLARSMR RAA 883
    Length:883
    Mass (Da):97,530
    Last modified:October 1, 2001 - v1
    Checksum:iEB0DB180BF8A9CDC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003017 Genomic DNA. Translation: BAB54816.1.
    RefSeqiNP_109477.1. NC_002682.1.
    WP_010916160.1. NC_002682.1.

    Genome annotation databases

    EnsemblBacteriaiBAB54816; BAB54816; BAB54816.
    GeneIDi1224449.
    KEGGimlo:mll9625.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003017 Genomic DNA. Translation: BAB54816.1 .
    RefSeqi NP_109477.1. NC_002682.1.
    WP_010916160.1. NC_002682.1.

    3D structure databases

    ProteinModelPortali Q98P39.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 266835.mll9625.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAB54816 ; BAB54816 ; BAB54816 .
    GeneIDi 1224449.
    KEGGi mlo:mll9625.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi RTETWAK.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci MLOT266835:GJ9L-7225-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiQ98P39_RHILO
    AccessioniPrimary (citable) accession number: Q98P39
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2001
    Last sequence update: October 1, 2001
    Last modified: October 1, 2014
    This is version 73 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, PlasmidImported, Reference proteomeImported

    External Data

    Dasty 3