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Protein
Submitted name:

Probable DNA ligase

Gene

mll9685

Organism
Rhizobium loti (strain MAFF303099) (Mesorhizobium loti)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMLOT266835:GJ9L-7279-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable DNA ligaseImported
Gene namesi
Ordered Locus Names:mll9685Imported
Encoded oniPlasmid pMLbImported
OrganismiRhizobium loti (strain MAFF303099) (Mesorhizobium loti)Imported
Taxonomic identifieri266835 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
ProteomesiUP000000552: Plasmid pMLb

Interactioni

Protein-protein interaction databases

STRINGi266835.mll9685.

Structurei

3D structure databases

ProteinModelPortaliQ98NY5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.
OMAiYRPHKSQ.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Q98NY5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVAVYDVEFP LPLNTQPMEA RAAGVLPRDD GPWQYEPKWD GFRCLAFKAG
60 70 80 90 100
KAVDLRAKSG KPLGRYFPEL MAALSALAAT EFVIDGEIII EIEGRASFDA
110 120 130 140 150
LQMRLHPAES RIRKLSRETP ARLVVFDMLV APEGRPRMEL PLRDRRAEAE
160 170 180 190 200
DLVAKAKTKT LRLSPATTSL ATADNWLKGA GSGSIDGVVA KLLNGPYRPG
210 220 230 240 250
ERAMVKVKRL RTADCVVGGF RYLNGKRQVG SLLLGLYNGD GLLDHVGFTS
260 270 280 290 300
TIANDERAVL TEKLENLRGG SGFTGKAPGG PSRWSTERSG EWEPVRPELV
310 320 330
VEVRFDHVTG DRFRHGTKLV RWRPDKAPLQ CTFEQLE
Length:337
Mass (Da):37,264
Last modified:October 1, 2001 - v1
Checksum:i87DC47DA84D7A0E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003017 Genomic DNA. Translation: BAB54870.1.
RefSeqiNP_109531.1. NC_002682.1.

Genome annotation databases

EnsemblBacteriaiBAB54870; BAB54870; BAB54870.
GeneIDi1224503.
KEGGimlo:mll9685.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003017 Genomic DNA. Translation: BAB54870.1.
RefSeqiNP_109531.1. NC_002682.1.

3D structure databases

ProteinModelPortaliQ98NY5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266835.mll9685.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB54870; BAB54870; BAB54870.
GeneIDi1224503.
KEGGimlo:mll9685.

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.
OMAiYRPHKSQ.
OrthoDBiEOG63NMFT.

Enzyme and pathway databases

BioCyciMLOT266835:GJ9L-7279-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MAFF303099Imported.

Entry informationi

Entry nameiQ98NY5_RHILO
AccessioniPrimary (citable) accession number: Q98NY5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: February 4, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.