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Q98NY5 (Q98NY5_RHILO) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:mll9685 EMBL BAB54870.1
Encoded onPlasmid pMLb Ref.1 EMBL BAB54870.1
OrganismRhizobium loti (strain MAFF303099) (Mesorhizobium loti) [Complete proteome] [HAMAP] EMBL BAB54870.1
Taxonomic identifier266835 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium

Protein attributes

Sequence length337 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL BAB54870.1
   Technical termComplete proteome
Plasmid EMBL BAB54870.1
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q98NY5 [UniParc].

Last modified October 1, 2001. Version 1.
Checksum: 87DC47DA84D7A0E3

FASTA33737,264
        10         20         30         40         50         60 
MVAVYDVEFP LPLNTQPMEA RAAGVLPRDD GPWQYEPKWD GFRCLAFKAG KAVDLRAKSG 

        70         80         90        100        110        120 
KPLGRYFPEL MAALSALAAT EFVIDGEIII EIEGRASFDA LQMRLHPAES RIRKLSRETP 

       130        140        150        160        170        180 
ARLVVFDMLV APEGRPRMEL PLRDRRAEAE DLVAKAKTKT LRLSPATTSL ATADNWLKGA 

       190        200        210        220        230        240 
GSGSIDGVVA KLLNGPYRPG ERAMVKVKRL RTADCVVGGF RYLNGKRQVG SLLLGLYNGD 

       250        260        270        280        290        300 
GLLDHVGFTS TIANDERAVL TEKLENLRGG SGFTGKAPGG PSRWSTERSG EWEPVRPELV 

       310        320        330 
VEVRFDHVTG DRFRHGTKLV RWRPDKAPLQ CTFEQLE 

« Hide

References

[1]"Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti."
Kaneko T., Nakamura Y., Sato S., Asamizu E., Kato T., Sasamoto S., Watanabe A., Idesawa K., Ishikawa A., Kawashima K., Kimura T., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Mochizuki Y., Nakayama S. expand/collapse author list , Nakazaki N., Shimpo S., Sugimoto M., Takeuchi C., Yamada M., Tabata S.
DNA Res. 7:331-338(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MAFF303099 EMBL BAB54870.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP003017 Genomic DNA. Translation: BAB54870.1.
RefSeqNP_109531.1. NC_002682.1.

3D structure databases

ProteinModelPortalQ98NY5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266835.mll9685.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAB54870; BAB54870; BAB54870.
GeneID1224503.
KEGGmlo:mll9685.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222508.
KOK01971.
OMAPFPPMEA.
OrthoDBEOG63NMFT.

Enzyme and pathway databases

BioCycMLOT266835:GJ9L-7279-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ98NY5_RHILO
AccessionPrimary (citable) accession number: Q98NY5
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: May 14, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)