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Q98LS4 (Q98LS4_RHILO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA topoisomerase EMBL BAB48389.1
Gene names
Ordered Locus Names:mlr0901
OrganismRhizobium loti (strain MAFF303099) (Mesorhizobium loti) [Complete proteome] [HAMAP]
Taxonomic identifier266835 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Phyllobacteriaceae › Mesorhizobium

Protein attributes

Sequence length685 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the type II topoisomerase family. RuleBase RU000380

Sequences

Sequence LengthMass (Da)Tools
Q98LS4 [UniParc].

Last modified October 1, 2001. Version 1.
Checksum: 511471E106BEE6ED

FASTA68575,556
        10         20         30         40         50         60 
MDDNNDLFGN MDKQPQPVRT PARPADPLVQ AAAKRPAATK DGSEGYSAAD IEVLEGLEPV 

        70         80         90        100        110        120 
RRRPGMYIGG TDDKAMHHLF AEVIDNSMDE AVAGHATFID VELSADGFLT VTDNGRGIPV 

       130        140        150        160        170        180 
DPHPKFKKPA LEVIMTTLHS GGKFDSKVYE TSGGLHGVGV SVVNALSDHL EVEVARGRQL 

       190        200        210        220        230        240 
YRQRFSRGIP VSGLEQLGEV HNRRGTKIRF HPDEQIFGKG AAFEPARLYR MTRSKAYLFG 

       250        260        270        280        290        300 
GVEIRWTCDP SLIKEKDQTP AKAEFHFPGG LKDYLKASLG DDFQVTREIF AGKSEKQGGH 

       310        320        330        340        350        360 
GSLEWAVTWF GGDGFINSYC NTIPTGEGGT HEAGFRNVLT RGLRAYADLV GNKRASIVTS 

       370        380        390        400        410        420 
EDVMISAAGM LSVFIREPEF VGQTKDRLAT IEAIRIVETA IRDPFDHWLA DNPQEASKLL 

       430        440        450        460        470        480 
EWVIARADER VRRRQEKEVS RKSAVRKLRL PGKLADCTQN AAAGAELFIV EGDSAGGSAK 

       490        500        510        520        530        540 
QARDRASQAV LPLRGKILNV ASAGNDKLAA NQQISDLIQA LGCGTRSKYR DEDLRYDRVI 

       550        560        570        580        590        600 
IMTDADVDGA HIASLLITFF YQEMPALVRG GHLYLAVPPL YSIRQGGKVA YARDDAHKDE 

       610        620        630        640        650        660 
LLRTEFTGRG KVELGRFKGL GEMMASQLKE TTMDPRKRTL LRVDVNEIDS ATKDRVDELM 

       670        680 
GTKPEARFRF IQERAEFAET EVLDI

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BA000012 Genomic DNA. Translation: BAB48389.1.
RefSeqNP_102603.1. NC_002678.2.

3D structure databases

HSSPHSSP built from PDB template 1AJ6 based on UniProtKB P06982.
ProteinModelPortalQ98LS4.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1225266.
GenomeReviewsGene locus mlr0901 in contig BA000012_GR.
KEGGmlo:mlr0901.
NMPDRfig|266835.1.peg.708.
PATRIC22475594. VBIMesLot2464_0716.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG304889.
OMAQARDKEF.
ProtClustDBPRK05559.

Family and domain databases

InterProIPR003594. ATPase-like_ATP-bd.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR001241. Topo_IIA.
IPR013759. Topo_IIA_B/N_ab.
IPR002288. Topo_IIA_B_C.
IPR013506. Topo_IIA_bsu_dom2.
IPR013760. Topo_IIA_cen.
IPR018522. TopoIIA_CS.
IPR005737. TopoIV_B_Gneg.
IPR006171. Toprim_domain.
[Graphical view]
Gene3DG3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit.
G3DSA:3.40.50.670. Topo_IIA_B/N_ab. 1 hit.
KOK02622.
PfamPF00204. DNA_gyraseB. 1 hit.
PF00986. DNA_gyraseB_C. 1 hit.
PF02518. HATPase_c. 1 hit.
PF01751. Toprim. 1 hit.
[Graphical view]
PRINTSPR00418. TPI2FAMILY.
SMARTSM00387. HATPase_c. 1 hit.
SM00433. TOP2c. 1 hit.
[Graphical view]
SUPFAMSSF55874. ATP_bd_ATPase. 1 hit.
SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
SSF56719. Topo_IIA_cen. 1 hit.
TIGRFAMsTIGR01055. ParE_Gneg. 1 hit.
PROSITEPS00177. TOPOISOMERASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ98LS4_RHILO
AccessionPrimary (citable) accession number: Q98LS4
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: January 25, 2012
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info