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Protein
Submitted name:

Mll1989 protein

Gene

mll1989

Organism
Rhizobium loti (strain MAFF303099) (Mesorhizobium loti)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi475 – 494H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Mll1989 proteinImported
Gene namesi
Ordered Locus Names:mll1989Imported
OrganismiRhizobium loti (strain MAFF303099) (Mesorhizobium loti)Imported
Taxonomic identifieri266835 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
Proteomesi
  • UP000000552 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266835.mll1989.

Structurei

3D structure databases

ProteinModelPortaliQ98JD8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini451 – 516HTH luxR-type DNA-bindingInterPro annotationAdd BLAST66

Phylogenomic databases

eggNOGiCOG2206. LUCA.
COG2771. LUCA.
HOGENOMiHOG000268981.
OMAiTRCQRGA.
OrthoDBiPOG091H09F9.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 2 hits.
InterProiView protein in InterPro
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PF01966. HD. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00421. HTH_LUXR. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiView protein in PROSITE
PS50043. HTH_LUXR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q98JD8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDVSIRRAD FMMVLAYASD LATGHSRDFA LKSCVLAMRI AELAGVSDEV
60 70 80 90 100
RRNAYHQSML RYVGCNADTD LLSATFGDEI ALRQDLVGLD MGNRAELGRV
110 120 130 140 150
FVQAFKRFYY DLEPDAQARA IEAAMSQALA VARPVLTAHC EVAQRIGARL
160 170 180 190 200
GLSDEIRRNL GQIYERWDGK GLPRGLSGED VLPAVRLITL AQDAIALSDA
210 220 230 240 250
VGIDGMAETV ASRGDGPYEA GLARLVSANA AALMEGIGAT VDRDTILALE
260 270 280 290 300
PDPPATLDEG ACDEAFLAIA DMIDMRMPFT QGHSRMVSEL AAGAGKRIGL
310 320 330 340 350
PEPDVRALRW SGCIHDIGEL VVPVATWMRN GPLSVRERDA AQLHAYYGER
360 370 380 390 400
ALASFGREGE AMAALVLRHH ERLDGSGYHR KVGGSDLSPA ARILAAAEAF
410 420 430 440 450
QTSREERPHR KALSSEAAAT QLRAAVRDGC ICPDAAEAVL SFAGQPSRRA
460 470 480 490 500
GPQALAGMTP REIEVLRLIA TGLTAKEVAR KLDISPKTAD HHIESVYSKI
510 520
GVTTRAAAAL YAVEHGLVRP GETRA
Length:525
Mass (Da):56,340
Last modified:October 1, 2001 - v1
Checksum:i3E2A08A968ED948C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000012 Genomic DNA. Translation: BAB49228.1.
RefSeqiWP_010910580.1. NC_002678.2.

Genome annotation databases

EnsemblBacteriaiBAB49228; BAB49228; BAB49228.
GeneIDi1226103.
KEGGimlo:mll1989.
PATRICi22477381. VBIMesLot2464_1599.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000012 Genomic DNA. Translation: BAB49228.1.
RefSeqiWP_010910580.1. NC_002678.2.

3D structure databases

ProteinModelPortaliQ98JD8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266835.mll1989.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB49228; BAB49228; BAB49228.
GeneIDi1226103.
KEGGimlo:mll1989.
PATRICi22477381. VBIMesLot2464_1599.

Phylogenomic databases

eggNOGiCOG2206. LUCA.
COG2771. LUCA.
HOGENOMiHOG000268981.
OMAiTRCQRGA.
OrthoDBiPOG091H09F9.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 2 hits.
InterProiView protein in InterPro
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PF01966. HD. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00421. HTH_LUXR. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiView protein in PROSITE
PS50043. HTH_LUXR_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ98JD8_RHILO
AccessioniPrimary (citable) accession number: Q98JD8
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: April 12, 2017
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.