Q98F85 (OMP16_RHILO) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Outer membrane lipoprotein Omp16 homolog

Gene names

Name:	omp16
Ordered Locus Names:	mll3887

Organism

Rhizobium loti (strain MAFF303099) (Mesorhizobium loti) [Complete proteome] [HAMAP]

Taxonomic identifier

266835 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Phyllobacteriaceae › Mesorhizobium › Rhizobium loti

Protein attributes

Sequence length	168 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell outer membrane; Lipid-anchor By similarity.
Sequence similarities	Belongs to the OmpA family. Pal subfamily. Contains 1 OmpA-like domain.

Ontologies

Keywords
Cellular component	Cell membrane Cell outer membrane Membrane
Domain	Signal
PTM	Lipoprotein Palmitate
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	cell outer membrane Inferred from electronic annotation. Source: UniProtKB-SubCell integral to membrane Inferred from electronic annotation. Source: InterPro plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential
	Chain	25 – 168	144	Outer membrane lipoprotein Omp16 homolog		PRO_0000020132
Regions
	Domain	50 – 167	118	OmpA-like
Amino acid modifications
	Lipidation	25	1	N-palmitoyl cysteine Potential
	Lipidation	25	1	S-diacylglycerol cysteine Potential

Sequences

	Sequence		Length	Mass (Da)
	Q98F85 [UniParc]. Last modified October 1, 2001. Version 1. Checksum: 03E260D3BA1ECBB3	FASTA	168	17,765
	10 20 30 40 50 60 MGRIAALTRN PVMIALVAML AIAGCASKKT PNNAADLGLN GAGAATPGSA QDFTVNIGDR 70 80 90 100 110 120 IFFDTDSSSI RADAQTTLAR QAQWLNQYKQ YAIVVEGHAD ERGTREYNLA LGARRAAAAR 130 140 150 160 DFLVSKGVAS SRLKTISYGK ERPVAVCDDI SCWSQNRRAV TTLSGAGS

References

[1]

"Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti." Kaneko T., Nakamura Y., Sato S., Asamizu E., Kato T., Sasamoto S., Watanabe A., Idesawa K., Ishikawa A., Kawashima K., Kimura T., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Mochizuki Y., Nakayama S. , Nakazaki N., Shimpo S., Sugimoto M., Takeuchi C., Yamada M., Tabata S. DNA Res. 7:331-338(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MAFF303099.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000012 Genomic DNA. Translation: BAB50682.1.
RefSeq	NP_104896.1. NC_002678.2.
3D structure databases
ProteinModelPortal	Q98F85.
ModBase	Search...
Protein-protein interaction databases
STRING	266835.mll3887.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAB50682; BAB50682; BAB50682.
GeneID	1227557.
KEGG	mlo:mll3887.
PATRIC	22480409. VBIMesLot2464_3093.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2885.
HOGENOM	HOG000189913.
KO	K03640.
OMA	QQDFTVN.
ProtClustDB	CLSK863900.
Enzyme and pathway databases
BioCyc	MLOT266835:GJ9L-3038-MONOMER.
Family and domain databases
Gene3D	3.30.1330.60. 1 hit.
InterPro	IPR006664. OMP_bac. IPR006690. OMPA-like_CS. IPR006665. OmpA/MotB_C. IPR014169. Pal_lipo. [Graphical view]
Pfam	PF00691. OmpA. 1 hit. [Graphical view]
PRINTS	PR01021. OMPADOMAIN.
SUPFAM	SSF103088. OmpA/MotB_C. 1 hit.
TIGRFAMs	TIGR02802. Pal_lipo. 1 hit.
PROSITE	PS01068. OMPA_1. 1 hit. PS51123. OMPA_2. 1 hit. PS51257. PROKAR_LIPOPROTEIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

OMP16_RHILO

Accession

Primary (citable) accession number: Q98F85

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 30, 2002
Last sequence update:	October 1, 2001
Last modified:	May 1, 2013
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program