Q98F08 (DADA1_RHILO) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
D-amino acid dehydrogenase 1 small subunit
EC=1.4.99.1

Gene names

Name:	dadA1
Ordered Locus Names:	mll3992

Organism

Rhizobium loti (strain MAFF303099) (Mesorhizobium loti) [Complete proteome] [HAMAP]

Taxonomic identifier

266835 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Phyllobacteriaceae › Mesorhizobium

Protein attributes

Sequence length	418 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Oxidative deamination of D-amino acids By similarity. HAMAP MF_01202
Catalytic activity	A D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor. HAMAP MF_01202
Cofactor	FAD By similarity. HAMAP MF_01202
Pathway	Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. HAMAP MF_01202
Subunit structure	Heterodimer of a small and a large subunit By similarity.
Sequence similarities	Belongs to the DadA oxidoreductase family.

Ontologies

Keywords
Ligand	FAD Flavoprotein
Molecular function	Oxidoreductase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	D-amino-acid dehydrogenase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 418	418	D-amino acid dehydrogenase 1 small subunit HAMAP MF_01202		PRO_0000166145
Regions
	Nucleotide binding	3 – 17	15	FAD Potential

Sequences

	Sequence		Length	Mass (Da)
	Q98F08 [UniParc]. Last modified October 1, 2001. Version 1. Checksum: E3F633DB2909E29C	FASTA	418	46,018
	10 20 30 40 50 60 MQIMVLGGGV IGVTTAYYLA EAGHEVTVLD RQKGPALETS FANAGEISPG YASPWAGPGI 70 80 90 100 110 120 PLKAIKWLLM KHGPLVVRPA FDPHMWTWLV KMLRNCTTER YAINKSRMVP LAEYSRDTLK 130 140 150 160 170 180 ALREATGITY DERTQGTLQL FRTQKQLDGT GGDVEVLKKY GVSYEILDQD GCIAAEPALG 190 200 210 220 230 240 GVREKFVGGL RLPHDETGDC KMFTEKLAEL CVARGVKFEY DTTIWRVLRS RNRVANLSTS 250 260 270 280 290 300 KGFKASEAYV MALGSYSAGF MRRMKRSIPV YPVKGYSITV PIKDADVAPV STVMDETYKV 310 320 330 340 350 360 AITRLGDRIR VGGTAEISGF DLRLHESRRR TLEHSVGDLF PGAGAMREAT FWCGLRPMTP 370 380 390 400 410 DGPPLIGRTE LSNLFLNTGH GTLGWTMACG SAKVLADIMS NKVPEIDARA LAQERYLK

References

[1]

"Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti." Kaneko T., Nakamura Y., Sato S., Asamizu E., Kato T., Sasamoto S., Watanabe A., Idesawa K., Ishikawa A., Kawashima K., Kimura T., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Mochizuki Y., Nakayama S. , Nakazaki N., Shimpo S., Sugimoto M., Takeuchi C., Yamada M., Tabata S. DNA Res. 7:331-338(2000) [PubMed: 11214968] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MAFF303099.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000012 Genomic DNA. Translation: BAB50759.1.
RefSeq	NP_104973.1. NC_002678.2.
3D structure databases
ProteinModelPortal	Q98F08.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1227634.
GenomeReviews	Gene locus mll3992 in contig BA000012_GR.
KEGG	mlo:mll3992.
NMPDR	fig|266835.1.peg.3077.
PATRIC	22480563. VBIMesLot2464_3170.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG729204.
OMA	VDRQPAV.
ProtClustDB	PRK00711.
Family and domain databases
HAMAP	MF_01202. DadA. [Tree]
InterPro	IPR023080. D-aa_DH_ssu_DadA. IPR006076. FAD-dep_OxRdtase. [Graphical view]
KO	K00285.
Pfam	PF01266. DAO. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

DADA1_RHILO

Accession

Primary (citable) accession number: Q98F08

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 5, 2002
Last sequence update:	October 1, 2001
Last modified:	January 25, 2012
This is version 61 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program