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Q98DP8

- Q98DP8_RHILO

UniProt

Q98DP8 - Q98DP8_RHILO

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
mll4606
Organism
Rhizobium loti (strain MAFF303099) (Mesorhizobium loti)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMLOT266835:GJ9L-3581-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:mll4606Imported
OrganismiRhizobium loti (strain MAFF303099) (Mesorhizobium loti)Imported
Taxonomic identifieri266835 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
ProteomesiUP000000552: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266835.mll4606.

Structurei

3D structure databases

ProteinModelPortaliQ98DP8.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiHELVEIK.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q98DP8-1 [UniParc]FASTAAdd to Basket

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MAGLEQYHTK RDFKKTSEPA GKVARTGKNE AGGIFVIHKH AATRLHYDLR    50
LEHDGVLWSW AVTRGPSLDP HEKRLAVHVE DHPIDYAPFE GTIPKGEYGG 100
GSVIVWDEGT WMPETDPAKA MKKGHISFEL NGHKLHGLWH LVRLKPRAGE 150
KRDNWLLIKS DDAAARPGED ILKERPESVK SGLTIEEVGE GKAAKGRKPE 200
VWHSNKPAAG KAKAAARKLD FIEPQLATLE RDAPPGKDWL HEVKFDGYRM 250
QAHIAGTDVR LLTRTGLDWT EKFGGEIIAE LAGLKCSDAI IDGEIVVLAD 300
SGVSSFALLQ QDLSAKRANR FLYYVFDLMR LDGKDLRAEP LVERKQALQE 350
LLGKQAENPA VRFSDHFFEP GKIMLEHACR MGLEGVVSKR ADAPYRSGRG 400
PTWVKSKCTA RQEFVIGGYL PSDKTGRGLR SLLVGYYEGG KLQYAGRVGT 450
GFSVKGATEL KTRLDALQAK ASPFDKAVPK GKGLVWVKPE LVGEVEFRSW 500
TSDRIVRHAS FQGLREDKPA EDVVQEKPKA ATGKAKPASS GAGTMTTSVK 550
LSHPDKLLWP DEKISKQGLL DHYAEVWPRM EQFVVNRPLS LVRAPDGIGG 600
PRFFQKHASA GMSDRIARMK DPTDGEEILF VRDFDGVAAL VQYGVVEIHI 650
WGCTIDKLEQ PDQIIFDLDP DEGVDVKAVR EAALDIRGKL DELSLPNFVK 700
TSGGKGYHVL VPLKPSADWE AVKTFAHDFA KALEQGAPDR YTATLSKKAR 750
TGKIFVDYLR NGRGSTTVAP YSSRAKKGAT VSMPVTWAEI EAGLAPNAFP 800
IGDKTTLAKL AEADPWMDFF KQGKVLKRG 829
Length:829
Mass (Da):91,470
Last modified:October 1, 2001 - v1
Checksum:i292904DE63BFA102
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000012 Genomic DNA. Translation: BAB51222.1.
RefSeqiNP_105436.1. NC_002678.2.

Genome annotation databases

EnsemblBacteriaiBAB51222; BAB51222; BAB51222.
GeneIDi1228097.
KEGGimlo:mll4606.
PATRICi22481505. VBIMesLot2464_3638.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000012 Genomic DNA. Translation: BAB51222.1 .
RefSeqi NP_105436.1. NC_002678.2.

3D structure databases

ProteinModelPortali Q98DP8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266835.mll4606.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB51222 ; BAB51222 ; BAB51222 .
GeneIDi 1228097.
KEGGi mlo:mll4606.
PATRICi 22481505. VBIMesLot2464_3638.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi HELVEIK.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci MLOT266835:GJ9L-3581-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MAFF303099Imported.

Entry informationi

Entry nameiQ98DP8_RHILO
AccessioniPrimary (citable) accession number: Q98DP8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: May 14, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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