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Q98DP8 (Q98DP8_RHILO) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:mll4606 EMBL BAB51222.1
OrganismRhizobium loti (strain MAFF303099) (Mesorhizobium loti) [Complete proteome] [HAMAP] EMBL BAB51222.1
Taxonomic identifier266835 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium

Protein attributes

Sequence length829 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q98DP8 [UniParc].

Last modified October 1, 2001. Version 1.
Checksum: 292904DE63BFA102

FASTA82991,470
        10         20         30         40         50         60 
MAGLEQYHTK RDFKKTSEPA GKVARTGKNE AGGIFVIHKH AATRLHYDLR LEHDGVLWSW 

        70         80         90        100        110        120 
AVTRGPSLDP HEKRLAVHVE DHPIDYAPFE GTIPKGEYGG GSVIVWDEGT WMPETDPAKA 

       130        140        150        160        170        180 
MKKGHISFEL NGHKLHGLWH LVRLKPRAGE KRDNWLLIKS DDAAARPGED ILKERPESVK 

       190        200        210        220        230        240 
SGLTIEEVGE GKAAKGRKPE VWHSNKPAAG KAKAAARKLD FIEPQLATLE RDAPPGKDWL 

       250        260        270        280        290        300 
HEVKFDGYRM QAHIAGTDVR LLTRTGLDWT EKFGGEIIAE LAGLKCSDAI IDGEIVVLAD 

       310        320        330        340        350        360 
SGVSSFALLQ QDLSAKRANR FLYYVFDLMR LDGKDLRAEP LVERKQALQE LLGKQAENPA 

       370        380        390        400        410        420 
VRFSDHFFEP GKIMLEHACR MGLEGVVSKR ADAPYRSGRG PTWVKSKCTA RQEFVIGGYL 

       430        440        450        460        470        480 
PSDKTGRGLR SLLVGYYEGG KLQYAGRVGT GFSVKGATEL KTRLDALQAK ASPFDKAVPK 

       490        500        510        520        530        540 
GKGLVWVKPE LVGEVEFRSW TSDRIVRHAS FQGLREDKPA EDVVQEKPKA ATGKAKPASS 

       550        560        570        580        590        600 
GAGTMTTSVK LSHPDKLLWP DEKISKQGLL DHYAEVWPRM EQFVVNRPLS LVRAPDGIGG 

       610        620        630        640        650        660 
PRFFQKHASA GMSDRIARMK DPTDGEEILF VRDFDGVAAL VQYGVVEIHI WGCTIDKLEQ 

       670        680        690        700        710        720 
PDQIIFDLDP DEGVDVKAVR EAALDIRGKL DELSLPNFVK TSGGKGYHVL VPLKPSADWE 

       730        740        750        760        770        780 
AVKTFAHDFA KALEQGAPDR YTATLSKKAR TGKIFVDYLR NGRGSTTVAP YSSRAKKGAT 

       790        800        810        820 
VSMPVTWAEI EAGLAPNAFP IGDKTTLAKL AEADPWMDFF KQGKVLKRG 

« Hide

References

[1]"Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti."
Kaneko T., Nakamura Y., Sato S., Asamizu E., Kato T., Sasamoto S., Watanabe A., Idesawa K., Ishikawa A., Kawashima K., Kimura T., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Mochizuki Y., Nakayama S. expand/collapse author list , Nakazaki N., Shimpo S., Sugimoto M., Takeuchi C., Yamada M., Tabata S.
DNA Res. 7:331-338(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MAFF303099 EMBL BAB51222.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000012 Genomic DNA. Translation: BAB51222.1.
RefSeqNP_105436.1. NC_002678.2.

3D structure databases

ProteinModelPortalQ98DP8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266835.mll4606.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAB51222; BAB51222; BAB51222.
GeneID1228097.
KEGGmlo:mll4606.
PATRIC22481505. VBIMesLot2464_3638.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMAHPLDYAD.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycMLOT266835:GJ9L-3581-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ98DP8_RHILO
AccessionPrimary (citable) accession number: Q98DP8
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: February 19, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)