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Protein
Submitted name:

Mll5392 protein

Gene

mll5392

Organism
Rhizobium loti (strain MAFF303099) (Mesorhizobium loti)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciMLOT266835:GJ9L-4213-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Mll5392 proteinImported
Gene namesi
Ordered Locus Names:mll5392Imported
OrganismiRhizobium loti (strain MAFF303099) (Mesorhizobium loti)Imported
Taxonomic identifieri266835 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
ProteomesiUP000000552: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266835.mll5392.

Structurei

3D structure databases

ProteinModelPortaliQ98BX2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000053897.
OrthoDBiEOG664CGD.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.40.50.1820. 1 hit.
InterProiIPR029058. AB_hydrolase.
IPR000073. AB_hydrolase_1.
IPR029787. Nucleotide_cyclase.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00111. ABHYDROLASE.
PR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF53474. SSF53474. 1 hit.
SSF55073. SSF55073. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q98BX2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRPIETRYAL SGEARIAYQV VGQGSLDLVF VPGFISNLDL HWEDEGYTRL
60 70 80 90 100
LRRLSAFSRL ILFDKRGTGL SDRVDAHNLP SLETRMDDVR AVMDAAGSGR
110 120 130 140 150
AALLGASEGA PMAMLFAATY PERTRALALY GGYAHFHKWV MPPERLNAFI
160 170 180 190 200
ATAETAWGTG ATLPNFAPGR VDDAHFTQWW ARFERLSASP TAAAALARMN
210 220 230 240 250
AEIDVRGVLA AISAPTLLIH RRNDARVDPD ASRFLAKKIP NARLVEIPGR
260 270 280 290 300
DHPIWTGDVD RVADLIEEFL TGTRAVAEAD RVLAALLVTR IYDTTRMGDR
310 320 330 340 350
MWSERSERFQ ETWRLLVGRH GGRALGTQGE MMISRFDGPA RAIRCAAALR
360 370 380 390 400
EAAQGIGVAS AQGVHVGEIE LRGPPVGLTA RVTMQLAAHA SRSDILASRL
410 420 430 440 450
VADLATGSGL HFEDASRITL DDLDEPMALV RAMSEQHLEP DCRVRTKTTE
460 470 480 490 500
PAVLTARESE VVSLIADGKS NAAIAAELRL SEHTVKRHVA NILLKLDLPS
510
RAAAAVFSVR HTGPDGP
Length:517
Mass (Da):56,331
Last modified:October 1, 2001 - v1
Checksum:i9C32C3ED95E0624E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000012 Genomic DNA. Translation: BAB51850.1.
RefSeqiNP_106064.1. NC_002678.2.
WP_010913188.1. NC_002678.2.

Genome annotation databases

EnsemblBacteriaiBAB51850; BAB51850; BAB51850.
GeneIDi1228725.
KEGGimlo:mll5392.
PATRICi22482794. VBIMesLot2464_4278.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000012 Genomic DNA. Translation: BAB51850.1.
RefSeqiNP_106064.1. NC_002678.2.
WP_010913188.1. NC_002678.2.

3D structure databases

ProteinModelPortaliQ98BX2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266835.mll5392.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB51850; BAB51850; BAB51850.
GeneIDi1228725.
KEGGimlo:mll5392.
PATRICi22482794. VBIMesLot2464_4278.

Phylogenomic databases

HOGENOMiHOG000053897.
OrthoDBiEOG664CGD.

Enzyme and pathway databases

BioCyciMLOT266835:GJ9L-4213-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.40.50.1820. 1 hit.
InterProiIPR029058. AB_hydrolase.
IPR000073. AB_hydrolase_1.
IPR029787. Nucleotide_cyclase.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00111. ABHYDROLASE.
PR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF53474. SSF53474. 1 hit.
SSF55073. SSF55073. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MAFF303099Imported.

Entry informationi

Entry nameiQ98BX2_RHILO
AccessioniPrimary (citable) accession number: Q98BX2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: March 4, 2015
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.