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Protein
Submitted name:

Homeodomain protein Nkx2.3

Gene

nkx2.3

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi142 – 201HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Homeodomain protein Nkx2.3Imported
Submitted name:
NK2 homeobox 3Imported
Submitted name:
NK2 transcription factor related 3Imported
Gene namesi
Name:nkx2.3Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 13

Organism-specific databases

ZFINiZDB-GENE-990415-178. nkx2.3.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSDARG00000039095.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000057093.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini140 – 200HomeoboxInterPro annotationAdd BLAST61

Keywords - Domaini

HomeoboxPROSITE-ProRule annotationSAAS annotationImported

Phylogenomic databases

eggNOGiKOG0842. Eukaryota.
ENOG410XR21. LUCA.
GeneTreeiENSGT00900000140771.
HOGENOMiHOG000231923.
HOVERGENiHBG006689.
KOiK09343.
OMAiSCMLAGR.
OrthoDBiEOG091G0LZ2.
TreeFamiTF351204.

Family and domain databases

CDDicd00086. homeodomain. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
PfamiView protein in Pfam
PF00046. Homeobox. 1 hit.
PRINTSiPR00024. HOMEOBOX.
SMARTiView protein in SMART
SM00389. HOX. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q98871-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMLPSPVTST PFSVKDILKL EQQTRQLQSL HPASHHAQLH PELQDRFQAP
60 70 80 90 100
SSCFLGGGDS PGFSDNEEKM SFLNSLSMQD SLVESSLSPP MFVHPALGHV
110 120 130 140 150
DTKLEDELED HETKSCGAIL RTPECEAEVH SDTERAQRQR TRRKPRVLFS
160 170 180 190 200
QAQVFELERR FKQQRYLSAP EREHLASTLK LTSTQVKIWF QNRRYKCKRQ
210 220 230 240 250
RQDKTLEMAG HHHPPPPRRV AVPVLVRDGK PCLTGSQSYN TTYAVNPGPY
260 270 280 290 300
TYNGYSSYNN AAYTNPYSCT YPSLPPLPAN TSTNALMSMS LNNLGTYSQP
310 320
QTSQGTPVSA CQGTLQGIRA W
Length:321
Mass (Da):36,093
Last modified:February 1, 1997 - v1
Checksum:i3C45305A10029132
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU929568 Genomic DNA. No translation available.
U66571 mRNA. Translation: AAC05228.1.
BC066525 mRNA. Translation: AAH66525.2.
RefSeqiNP_571498.1. NM_131423.1.
UniGeneiDr.269.

Genome annotation databases

EnsembliENSDART00000057094; ENSDARP00000057093; ENSDARG00000039095.
GeneIDi30698.
KEGGidre:30698.

Similar proteinsi

Entry informationi

Entry nameiQ98871_DANRE
AccessioniPrimary (citable) accession number: Q98871
Secondary accession number(s): Q6NYN2
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: October 25, 2017
This is version 140 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported