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Protein
Submitted name:

Myocyte enhancer factor 2D MEF2D

Gene

mef2d

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • heart formation Source: ZFIN
  • positive regulation of transcription by RNA polymerase II Source: ZFIN
  • skeletal muscle myosin thick filament assembly Source: ZFIN
  • transcription, DNA-templated Source: UniProtKB-UniRule

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Myocyte enhancer factor 2D MEF2DImported
Gene namesi
Name:mef2dImported
Synonyms:mef2DImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-990415-164 mef2d

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiQ98870

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliQ98870
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiKOG0014 Eukaryota
COG5068 LUCA
HOGENOMiHOG000230620
HOVERGENiHBG053944
KOiK09262
PhylomeDBiQ98870

Family and domain databases

CDDicd00265 MADS_MEF2_like, 1 hit
Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR022102 HJURP_C
IPR033896 MADS_MEF2-like
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF12347 HJURP_C, 1 hit
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS00350 MADS_BOX_1, 1 hit
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q98870-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRKKIQIQR ITDERNRQVT FTKRKFGLMK KAYELSVLCD CEIALIIFNH
60 70 80 90 100
SNKLFQYAST DMDKVLLKYT EYNEPHESRT NADIIEALNK KEHRDSESPD
110 120 130 140 150
PEEPFSLTPR TEEKYKKIDE EFDKMMQSYR LSSTVPAPTF SMPVTVPVSN
160 170 180 190 200
QSPLPFSNPS SLVTTSFVTS TLTDPRLLSP QQPQLQRNTV SPGLPQRPAS
210 220 230 240 250
AGALLGGDLN NSNGACPSPV ANGYVSARAS PGLLSVSNGN SMGKVVQAKS
260 270 280 290 300
PPPPSTQMAN SRKPDLRVIT SQSSKGLMQL TDEELELVSE NAQRLGTSQV
310 320 330 340 350
TQPLTTPVVS VATPSLLTPF SMPTAYNTEY QLTSADLTAL QAFTPSGALL
360 370 380 390 400
PGNMTTWQQQ QQPSVSQQPQ QQPSVSQQQT QQQQQQQQQP QQLTLASLSN
410 420 430 440 450
LVPVGTIPHG ATLTVNTNPS ISIKSEPVSP NRDRSTPSST PGAVGGVSGL
460 470 480 490 500
TVSQYPGTLR LEPTGRSPVD SISSNGSSYE GSDRDDSGQP RPPDFSSLGL
510 520
LRATGDQPAQ AEQQESANVK RMRLDTWVT
Length:529
Mass (Da):57,484
Last modified:February 1, 1997 - v1
Checksum:i89E672859EEC2A8E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U66570 mRNA Translation: AAC05227.1
RefSeqiNP_571392.1, NM_131317.1
UniGeneiDr.75103

Genome annotation databases

GeneIDi30580
KEGGidre:30580

Similar proteinsi

Entry informationi

Entry nameiQ98870_DANRE
AccessioniPrimary (citable) accession number: Q98870
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 123 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health