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Protein
Submitted name:

Pax9 protein

Gene

pax9

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • animal organ morphogenesis Source: InterPro
  • hard palate development Source: ZFIN
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDevelopmental proteinSAAS annotation, DNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Pax9 proteinImported
Submitted name:
Pax9bImported
Gene namesi
Name:pax9Imported
Synonyms:Pax9Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 17

Organism-specific databases

ZFINiZDB-GENE-980526-399. pax9.

Subcellular locationi

  • Nucleus PROSITE-ProRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSDARG00000053829.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000070415.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 130PairedInterPro annotationAdd BLAST127

Keywords - Domaini

Paired boxPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3517. Eukaryota.
ENOG4111FI9. LUCA.
GeneTreeiENSGT00680000099553.
HOGENOMiHOG000230938.
HOVERGENiHBG098340.

Family and domain databases

CDDicd00131. PAX. 1 hit.
Gene3Di1.10.10.10. 2 hits.
InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR001523. Paired_dom.
IPR033204. PAX9.
IPR011991. WHTH_DNA-bd_dom.
PANTHERiPTHR24329:SF432. PTHR24329:SF432. 1 hit.
PfamiView protein in Pfam
PF00292. PAX. 1 hit.
PRINTSiPR00027. PAIREDBOX.
SMARTiView protein in SMART
SM00351. PAX. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS00034. PAIRED_1. 1 hit.
PS51057. PAIRED_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q98866-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEPAFGEVNQ LGGVFVNGRP LPNAIRLRIV ELAQLGIRPC DISRQLRVSH
60 70 80 90 100
GCVSKILARY NETGSILPGA IGGSKPRVTT PNVVKHIRTY KQRDPGIFAW
110 120 130 140 150
EIRDRLLADG VCDKFNLPSV SSISRILRNK IGNLSQQNQY ESSKQASHPQ
160 170 180 190 200
PQPTIPYNHL YSYPTPIAAA GTKVPTPPGM PTLPGHMAMH RIWPSSHSVT
210 220 230 240 250
DILGIRSITE QQNAEWIAHS EQLCHSSQHP SLPPSHPSVT LHGVQRHHVG
260 270
LCDRPHMAAA QWQCSLSPQL
Length:270
Mass (Da):29,759
Last modified:February 1, 1997 - v1
Checksum:iA0C1E0507934A4E1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX511145 Genomic DNA. No translation available.
U40932 mRNA. Translation: AAC60035.1.
BC075867 mRNA. Translation: AAH75867.1.
RefSeqiXP_005158890.1. XM_005158833.3.
UniGeneiDr.1467.

Genome annotation databases

EnsembliENSDART00000075932; ENSDARP00000070411; ENSDARG00000053829.
GeneIDi30558.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX511145 Genomic DNA. No translation available.
U40932 mRNA. Translation: AAC60035.1.
BC075867 mRNA. Translation: AAH75867.1.
RefSeqiXP_005158890.1. XM_005158833.3.
UniGeneiDr.1467.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000070415.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000075932; ENSDARP00000070411; ENSDARG00000053829.
GeneIDi30558.

Organism-specific databases

CTDi5083.
ZFINiZDB-GENE-980526-399. pax9.

Phylogenomic databases

eggNOGiKOG3517. Eukaryota.
ENOG4111FI9. LUCA.
GeneTreeiENSGT00680000099553.
HOGENOMiHOG000230938.
HOVERGENiHBG098340.

Gene expression databases

BgeeiENSDARG00000053829.

Family and domain databases

CDDicd00131. PAX. 1 hit.
Gene3Di1.10.10.10. 2 hits.
InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR001523. Paired_dom.
IPR033204. PAX9.
IPR011991. WHTH_DNA-bd_dom.
PANTHERiPTHR24329:SF432. PTHR24329:SF432. 1 hit.
PfamiView protein in Pfam
PF00292. PAX. 1 hit.
PRINTSiPR00027. PAIREDBOX.
SMARTiView protein in SMART
SM00351. PAX. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS00034. PAIRED_1. 1 hit.
PS51057. PAIRED_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ98866_DANRE
AccessioniPrimary (citable) accession number: Q98866
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: February 15, 2017
This is version 133 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.