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Protein
Submitted name:

Paired box 9

Gene

pax9

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • DNA binding transcription factor activity Source: InterPro
  • sequence-specific DNA binding Source: ZFIN

GO - Biological processi

  • animal organ morphogenesis Source: InterPro
  • hard palate development Source: ZFIN
  • transcription, DNA-templated Source: UniProtKB-UniRule

Keywordsi

Molecular functionDevelopmental proteinSAAS annotation, DNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Paired box 9Imported
Submitted name:
Pax9aImported
Gene namesi
Name:pax9Imported
Synonyms:Pax9Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 17

Organism-specific databases

ZFINiZDB-GENE-980526-399 pax9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSDARG00000053829

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000070415

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 130PairedInterPro annotationAdd BLAST127

Keywords - Domaini

Paired boxPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3517 Eukaryota
ENOG4111FI9 LUCA
GeneTreeiENSGT00680000099553
HOGENOMiHOG000230938
HOVERGENiHBG009115
KOiK09382
OMAiWQHAGST
OrthoDBiEOG091G0S4E
TreeFamiTF315397

Family and domain databases

CDDicd00131 PAX, 1 hit
Gene3Di1.10.10.10, 2 hits
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR001523 Paired_dom
IPR033204 PAX9
IPR036388 WH-like_DNA-bd_sf
PANTHERiPTHR24329:SF297 PTHR24329:SF297, 1 hit
PfamiView protein in Pfam
PF00292 PAX, 1 hit
PRINTSiPR00027 PAIREDBOX
SMARTiView protein in SMART
SM00351 PAX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS00034 PAIRED_1, 1 hit
PS51057 PAIRED_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q98865-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEPAFGEVNQ LGGVFVNGRP LPNAIRLRIV ELAQLGIRPC DISRQLRVSH
60 70 80 90 100
GCVSKILARY NETGSILPGA IGGSKPRVTT PNVVKHIRTY KQRDPGIFAW
110 120 130 140 150
EIRDRLLADG VCDKFNLPSV SSISRILRNK IGNLSQQNQY ESSKQASHPQ
160 170 180 190 200
PQPTIPYNHL YSYPTPIAAA GTKVPTPPGM PTLPGHMAMH RIWPSSHSVT
210 220 230 240 250
DILGIRSITE QQISDNPSFP SAKLEEWRAI NRSNFSPANS PLVNGVDKPH
260 270 280 290 300
LEPEAKYNQT PNGLPTVNSY VTAPSIHHYH PPTQVSPYMG YSGTTSAYVT
310 320 330 340
GPTWQPPSGS ALSPHSCDIS SPLAFKSMSA TRDSVHSLVA SAL
Length:343
Mass (Da):37,329
Last modified:February 1, 1997 - v1
Checksum:i941440ED580F4B93
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX511145 Genomic DNA No translation available.
U40931 mRNA Translation: AAC60034.1
RefSeqiNP_571373.1, NM_131298.1
UniGeneiDr.1467

Genome annotation databases

EnsembliENSDART00000075936; ENSDARP00000070415; ENSDARG00000053829
GeneIDi30558
KEGGidre:30558

Similar proteinsi

Entry informationi

Entry nameiQ98865_DANRE
AccessioniPrimary (citable) accession number: Q98865
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 146 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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