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Q98139

- Q98139_HHV8

UniProt

Q98139 - Q98139_HHV8

Protein
Submitted name:

Major capsid protein

Gene
N/A
Organism
Human herpesvirus 8 (HHV-8) (Kaposi's sarcoma-associated herpesvirus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (01 Feb 1997)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural molecule activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Major capsid proteinImported
    OrganismiHuman herpesvirus 8 (HHV-8) (Kaposi's sarcoma-associated herpesvirus)Imported
    Taxonomic identifieri37296 [NCBI]
    Taxonomic lineageiVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeGammaherpesvirinaeRhadinovirus
    Virus hostiHomo sapiens (Human) [TaxID: 9606]

    Subcellular locationi

    GO - Cellular componenti

    1. viral capsid Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliQ98139.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Family and domain databases

    InterProiIPR000912. Herpes_MCP.
    IPR023233. Herpes_MCP_upper.
    [Graphical view]
    PfamiPF03122. Herpes_MCP. 1 hit.
    [Graphical view]
    PRINTSiPR00235. HSVCAPSIDMCP.
    SUPFAMiSSF103417. SSF103417. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q98139-1 [UniParc]FASTAAdd to Basket

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    MEATLEQRPF PYLATEANLL TQIKESAADG LFKSFQLLLG KDAREGSVRF     50
    EALLGVYTNV VEFVKFLETA LAAACVNTEF KDLRRMIDGK IQFKISMPTI 100
    AHGDGRRPNK QRQYIVMKAC NKHHIGAEIE LAAADIELLF AEKETPLDFT 150
    EYAGAIKTIT SALQFGMDAL ERGLVDTVLA VKLRHAPPVF ILKTLGDPVY 200
    SERGLKKAVK SDMVSMFKAH LIEHSFFLDK AELMTRGKQY VLTMLSDMLA 250
    AVCEDTVFKG VSTYTTASGQ QVAGVLETTD SVMRRLMNLL GQVESAMSGP 300
    AAYASYVVRG ANLVTAVSYG RAMRNFEQFM ARIVDHPNAL PSVEGDKAAL 350
    ADGHDEIQRT RIAASLVKIG DKFVAIESLQ RMYNETQFPC PLNRRIQYTY 400
    FFPVGLHLPV PRYSTSVSVR GVESPAIQST ETWVVNKNNV PLCFGYQNAL 450
    KSICHPRMHN PTQSAQALNQ AFPDPDGGHG YGLRYEQTPN MNLFRTFHQY 500
    YMGKNVAFVP DVAQKALVTT EDLLHPTSHR LLRLEVHPFF DFFVHPCPGA 550
    RGSYRATHRT MVGNIPQPLA PREFQESRGA QFDAVTNMTH VIDQLTIDVI 600
    QETAFDPAYP LFCYVIEAMI HGQEEKFVMN MPLIALVIQT YWVNSGKLAF 650
    VNSYHMVRFI CTHIGNGSIP KEAHGHYRKI LGELIALEQA LLKLAGHETV 700
    GRTPITHLVS ALLDPHLLPP FAYHDVFTDL MQKSSRQPII KIGDQNYDNP 750
    QNRATFINLR GRMEDLVNNL VNIYQTRVNE DHDERHVLDV APLDENDYNP 800
    VLEKLFYYVL MPVCSNGHMC GMGVDYQNVA LTLTYNGPVF ADVVNAQDDI 850
    LLHLENGTLK DILQAGDIRP TVDMIRVLCT SFLTCPFVTQ AARVITKRDP 900
    AQSFATHEYG KDVAQTVLVN GFGAFAVADR SREAAETMFY PVPFNKLYAD 950
    PLVAATLHPL LPNYVTRLPN QRNAVVFNVP SNLMAEYEEW HKSPVAAYAA 1000
    SCQATPGAIS AMVSMHQKLS APSFICQAKH RMHPGFAMTV VRTDEVLAEH 1050
    ILYCSRASTS MFVGLPSVVR REVRSDAVTF EITHEIASLH TALGYSSVIA 1100
    PAHVAAITTD MGVHCQDLFM IFPGDAYQDR QLHDYIKMKA GVQTGSPGNR 1150
    MDHVGYTAGV PRCENLPGLS HGQLATCEII PTPVTSDVAY FQTPSNPRGR 1200
    AASVVSCDAY SNESAERLFY DHSIPDPAYE CRSTNNPWAS QRGSLGDVLY 1250
    NITFRQTALP GMYSPCRQFF HKEDIMRYNR GLYTLVNEYS ARLAGAPATS 1300
    TTDLQYVVVN GTDVFLDQPC HMLQEAYPTL AASHRVMLAE YMSNKQTHAP 1350
    VHMGQYLIEE VAPMKRLLKL GNKVVY 1376
    Length:1,376
    Mass (Da):153,402
    Last modified:February 1, 1997 - v1
    Checksum:iF2B7DF6F757C9215
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U40377 Genomic DNA. Translation: AAB08392.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U40377 Genomic DNA. Translation: AAB08392.1 .

    3D structure databases

    ProteinModelPortali Q98139.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR000912. Herpes_MCP.
    IPR023233. Herpes_MCP_upper.
    [Graphical view ]
    Pfami PF03122. Herpes_MCP. 1 hit.
    [Graphical view ]
    PRINTSi PR00235. HSVCAPSIDMCP.
    SUPFAMi SSF103417. SSF103417. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Identification of herpesvirus-like DNA sequences in AIDS-associated Kaposi's sarcoma."
      Chang Y., Cesarman E., Pessin M.S., Lee F., Culpepper J., Knowles D.M., Moore P.S.
      Science 266:1865-1869(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE OF 1-203.
    2. "In vitro establishment and characterization of two acquired immunodeficiency syndrome-related lymphoma cell lines (BC-1 and BC-2) containing Kaposi's sarcoma-associated herpesvirus-like (KSHV) DNA sequences."
      Cesarman E., Moore P.S., Rao P.H., Inghirami G., Knowles D.M., Chang Y.
      Blood 86:2708-2714(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE OF 1-203.
    3. "Detection of herpesvirus-like DNA sequences in Kaposi's sarcoma in patients with and without HIV infection."
      Moore P.S., Chang Y.
      N. Engl. J. Med. 332:1181-1185(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE OF 1-203.
    4. "Primary characterization of a herpesvirus agent associated with Kaposi's sarcomae."
      Moore P.S., Gao S.J., Dominguez G., Cesarman E., Lungu O., Knowles D.M., Garber R., Pellett P.E., McGeoch D.J., Chang Y.
      J. Virol. 70:549-558(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiQ98139_HHV8
    AccessioniPrimary (citable) accession number: Q98139
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 1, 1997
    Last sequence update: February 1, 1997
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)