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Protein

30S ribosomal protein S8e

Gene

rps8e

Organism
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S8eUniRule annotation
Gene namesi
Name:rps8eUniRule annotation
Ordered Locus Names:SSO0164
OrganismiSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Taxonomic identifieri273057 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000001974 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001222801 – 13330S ribosomal protein S8eAdd BLAST133

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi273057.SSO0164.

Structurei

Secondary structure

1133
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi39 – 47Combined sources9
Beta strandi62 – 67Combined sources6
Turni68 – 71Combined sources4
Beta strandi72 – 81Combined sources10
Helixi88 – 91Combined sources4
Turni92 – 94Combined sources3
Beta strandi101 – 115Combined sources15
Beta strandi119 – 125Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2KCONMR-A1-133[»]
ProteinModelPortaliQ980W3.
SMRiQ980W3.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ980W3.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S8e family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04154. Archaea.
COG2007. LUCA.
HOGENOMiHOG000108969.
InParanoidiQ980W3.
KOiK02995.
OMAiNPNYVRR.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e. 1 hit.
InterProiIPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiPS01193. RIBOSOMAL_S8E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q980W3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGFYQGPDNR KITGGLKGKH RDKRKYEIGN PPTFTTLSAE DIRIKDRTLG
60 70 80 90 100
GNFKVRLKYT TTANVLDPAT NTAKKVKILE ILETPANKEL ARRGIIIRGA
110 120 130
KIRTEAGLAV VTSRPGQDGV INAVLLKNES QRS
Length:133
Mass (Da):14,659
Last modified:October 1, 2001 - v1
Checksum:i90F6D09214FA09D3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006641 Genomic DNA. Translation: AAK40509.1.
PIRiF90156.
RefSeqiWP_009990388.1. NC_002754.1.

Genome annotation databases

EnsemblBacteriaiAAK40509; AAK40509; SSO0164.
GeneIDi27426454.
KEGGisso:SSO0164.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006641 Genomic DNA. Translation: AAK40509.1.
PIRiF90156.
RefSeqiWP_009990388.1. NC_002754.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2KCONMR-A1-133[»]
ProteinModelPortaliQ980W3.
SMRiQ980W3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi273057.SSO0164.

Protocols and materials databases

DNASUi1453336.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK40509; AAK40509; SSO0164.
GeneIDi27426454.
KEGGisso:SSO0164.

Phylogenomic databases

eggNOGiarCOG04154. Archaea.
COG2007. LUCA.
HOGENOMiHOG000108969.
InParanoidiQ980W3.
KOiK02995.
OMAiNPNYVRR.

Miscellaneous databases

EvolutionaryTraceiQ980W3.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e. 1 hit.
InterProiIPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiPS01193. RIBOSOMAL_S8E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS8E_SULSO
AccessioniPrimary (citable) accession number: Q980W3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 27, 2002
Last sequence update: October 1, 2001
Last modified: November 2, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.