DNA-directed RNA polymerase, subunit B'' (RpoB2) - Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)

Preferred order of sections

Names and origin

Protein names

Submitted name:
DNA-directed RNA polymerase, subunit B'' (RpoB2) EMBL AAK40568.1
EC=2.7.7.6 EMBL AAK40568.1

Gene names

Name:	rpoB2 EMBL AAK40568.1
Ordered Locus Names:	SSO3254

Organism

Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) EMBL AAK40568.1

Taxonomic identifier

273057 [NCBI]

Taxonomic lineage

Archaea › Crenarchaeota › Thermoprotei › Sulfolobales › Sulfolobaceae › Sulfolobus

Protein attributes

Sequence length	480 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Transcription
Cellular component	DNA-directed RNA polymerase EMBL AAK40568.1
Molecular function	Nucleotidyltransferase EMBL AAK40568.1 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW ribonucleoside binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q980R0 [UniParc].

Last modified October 1, 2001. Version 1.
Checksum: C7AD326FEB87ED0D
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FASTA

480

54,035

        10         20         30         40         50         60 
MASNLTIDER WRVIEAYFKS KGLVRQHLDS YNDFVRNKLQ EIIDEQGEIP TEIPGLKVRL 

        70         80         90        100        110        120 
GKIRIGKPRV RESDRGEREI SPMEARLRNL TYAAPLWLTM IPVENNIEAE PEEVYIGDLP 

       130        140        150        160        170        180 
IMLKSAIDPI SQYTLDKLIE IGEDPKDPGG YFIVNGSERV IVTQEDLAPN RVLVDTGKTG 

       190        200        210        220        230        240 
SNITHTAKII SSTAGYRVPV TIERLKDGTF HVSFPAVPGK IPFVILMRAL GILTDRDIVY 

       250        260        270        280        290        300 
AVSLDPEVQN ELFPSLEQAS SIANVDDALD FIGSRVAIGQ KRENRIEKAQ QIIDKYFLPH 

       310        320        330        340        350        360 
LGTSAEDRKK KAYYLAYAIS KVIELYLGRR EPDDKDHYAN KRLRLAGDLF ASLFRVAFKA 

       370        380        390        400        410        420 
FVKDLTYQLE KSKVRGRKLA LKALVRPDIV TERIRHALAT GNWVGGRTGV SQLLDRTNWL 

       430        440        450        460        470        480 
SMLSHLRRVI SSLARGQPNF EARDLHGTQW GRMCPFETPE GPNSGLVKNL AVNGSNCCTE

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References

[1]

"The complete genome of the crenarchaeon Sulfolobus solfataricus P2."
She Q., Singh R.K., Confalonieri F., Zivanovic Y., Allard G., Awayez M.J., Chan-Weiher C.C.-Y., Clausen I.G., Curtis B.A., De Moors A., Erauso G., Fletcher C., Gordon P.M.K., Heikamp-de Jong I., Jeffries A.C., Kozera C.J., Medina N., Peng X.

Van der Oost J.
Proc. Natl. Acad. Sci. U.S.A. 98:7835-7840(2001) [PubMed: 11427726] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35092 / DSM 1617 / JCM 11322 / P2.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE006641 Genomic DNA. Translation: AAK40568.1.
PIR	A99164.
RefSeq	NP_341778.1. NC_002754.1.
3D structure databases
HSSP	HSSP built from PDB template 1I50 based on UniProtKB P08518.
ProteinModelPortal	Q980R0.
SMR	Q980R0. Positions 5-472.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1455378.
GenomeReviews	Gene locus SSO3254 in contig AE006641_GR.
KEGG	sso:SSO3254.
NMPDR	fig\|273057.1.peg.201.
Phylogenomic databases
HOGENOM	HBG496841.
OMA	LAGDLME.
ProtClustDB	PRK09606.
Enzyme and pathway databases
BioCyc	SSOL273057:SSO3254-MONOMER.
Family and domain databases
InterPro	IPR015712. DNA-dir_RNA_pol_su2. IPR007644. RNA_pol_bsu_protrusion. IPR007642. RNA_pol_Rpb2_2. IPR007645. RNA_pol_Rpb2_3. [Graphical view]
KO	K03045.
PANTHER	PTHR20856. RNA_pol_I_sub2. 1 hit.
Pfam	PF04563. RNA_pol_Rpb2_1. 1 hit. PF04561. RNA_pol_Rpb2_2. 1 hit. PF04565. RNA_pol_Rpb2_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q980R0_SULSO

Accession

Primary (citable) accession number: Q980R0

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2001
Last sequence update:	October 1, 2001
Last modified:	January 25, 2012
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry information