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Q980K0 (RPOL_SULSO) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
DNA-directed RNA polymerase subunit L

EC=2.7.7.6
Gene names
Name:rpoL
Ordered Locus Names:SSO5577
OrganismSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) [Reference proteome] [HAMAP]
Taxonomic identifier273057 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus

Protein attributes

Sequence length92 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. HAMAP-Rule MF_00261

Catalytic activity

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). HAMAP-Rule MF_00261

Sequence similarities

Belongs to the archaeal RpoL/eukaryotic RPB11/RPC19 RNA polymerase subunit family.

Ontologies

Keywords
   Biological processTranscription
   Cellular componentDNA-directed RNA polymerase
   Molecular functionNucleotidyltransferase
Transferase
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranscription, DNA-templated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

DNA-directed RNA polymerase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 9292DNA-directed RNA polymerase subunit L HAMAP-Rule MF_00261
PRO_0000149339

Secondary structure

................. 92
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q980K0 [UniParc].

Last modified October 1, 2001. Version 1.
Checksum: B8F3DDA07598088C

FASTA9210,285
        10         20         30         40         50         60 
MEIRILKSES NYLELEIEGE DHTLGNLIAG TLRRISGVSF ASYYQPHPLS DKIIVKILTD 

        70         80         90 
GSITPKDALL KAIENIRGMT SHYIDEIKGL TK 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE006641 Genomic DNA. Translation: AAK40631.1.
PIRH90171.
RefSeqNP_341841.1. NC_002754.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2PA8X-ray1.76L1-92[»]
2PMZX-ray3.40L/X1-92[»]
3HKZX-ray3.40L/V1-92[»]
ProteinModelPortalQ980K0.
SMRQ980K0. Positions 1-92.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-60647N.
STRING273057.SSO5577.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAK40631; AAK40631; SSO5577.
GeneID1455441.
KEGGsso:SSO5577.

Phylogenomic databases

eggNOGCOG1761.
HOGENOMHOG000179862.
KOK03056.
OMAYTIEHPI.

Enzyme and pathway databases

BioCycSSOL273057:GCH2-283-MONOMER.

Family and domain databases

HAMAPMF_00261. RNApol_arch_L.
InterProIPR009025. RBP11-like_dimer.
IPR008193. RNA_pol_Rpb11_13-16kDa_CS.
IPR022905. RNAP_L.
[Graphical view]
PfamPF01193. RNA_pol_L. 1 hit.
[Graphical view]
SUPFAMSSF55257. SSF55257. 1 hit.
PROSITEPS01154. RNA_POL_L_13KD. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ980K0.

Entry information

Entry nameRPOL_SULSO
AccessionPrimary (citable) accession number: Q980K0
Entry history
Integrated into UniProtKB/Swiss-Prot: May 27, 2002
Last sequence update: October 1, 2001
Last modified: May 14, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references