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Q980K0

- RPOL_SULSO

UniProt

Q980K0 - RPOL_SULSO

Protein

DNA-directed RNA polymerase subunit L

Gene

rpoL

Organism
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

    Catalytic activityi

    Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. DNA-directed RNA polymerase activity Source: UniProtKB-KW

    GO - Biological processi

    1. transcription, DNA-templated Source: InterPro

    Keywords - Molecular functioni

    Nucleotidyltransferase, Transferase

    Keywords - Biological processi

    Transcription

    Enzyme and pathway databases

    BioCyciSSOL273057:GCH2-283-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
    Gene namesi
    Name:rpoL
    Ordered Locus Names:SSO5577
    OrganismiSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
    Taxonomic identifieri273057 [NCBI]
    Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
    ProteomesiUP000001974: Chromosome

    Subcellular locationi

    Keywords - Cellular componenti

    DNA-directed RNA polymerase

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 9292DNA-directed RNA polymerase subunit LPRO_0000149339Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-60647N.
    STRINGi273057.SSO5577.

    Structurei

    Secondary structure

    1
    92
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi2 – 98
    Beta strandi12 – 187
    Helixi22 – 3312
    Beta strandi38 – 447
    Beta strandi48 – 503
    Beta strandi53 – 597
    Beta strandi61 – 633
    Helixi65 – 9127

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2PA8X-ray1.76L1-92[»]
    2PMZX-ray3.40L/X1-92[»]
    3HKZX-ray3.40L/V1-92[»]
    ProteinModelPortaliQ980K0.
    SMRiQ980K0. Positions 1-92.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ980K0.

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG1761.
    HOGENOMiHOG000179862.
    KOiK03056.
    OMAiYTIEHPI.

    Family and domain databases

    HAMAPiMF_00261. RNApol_arch_L.
    InterProiIPR009025. RBP11-like_dimer.
    IPR008193. RNA_pol_Rpb11_13-16kDa_CS.
    IPR022905. RNAP_L.
    [Graphical view]
    PfamiPF01193. RNA_pol_L. 1 hit.
    [Graphical view]
    SUPFAMiSSF55257. SSF55257. 1 hit.
    PROSITEiPS01154. RNA_POL_L_13KD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q980K0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEIRILKSES NYLELEIEGE DHTLGNLIAG TLRRISGVSF ASYYQPHPLS   50
    DKIIVKILTD GSITPKDALL KAIENIRGMT SHYIDEIKGL TK 92
    Length:92
    Mass (Da):10,285
    Last modified:October 1, 2001 - v1
    Checksum:iB8F3DDA07598088C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006641 Genomic DNA. Translation: AAK40631.1.
    PIRiH90171.
    RefSeqiNP_341841.1. NC_002754.1.

    Genome annotation databases

    EnsemblBacteriaiAAK40631; AAK40631; SSO5577.
    GeneIDi1455441.
    KEGGisso:SSO5577.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006641 Genomic DNA. Translation: AAK40631.1 .
    PIRi H90171.
    RefSeqi NP_341841.1. NC_002754.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2PA8 X-ray 1.76 L 1-92 [» ]
    2PMZ X-ray 3.40 L/X 1-92 [» ]
    3HKZ X-ray 3.40 L/V 1-92 [» ]
    ProteinModelPortali Q980K0.
    SMRi Q980K0. Positions 1-92.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-60647N.
    STRINGi 273057.SSO5577.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAK40631 ; AAK40631 ; SSO5577 .
    GeneIDi 1455441.
    KEGGi sso:SSO5577.

    Phylogenomic databases

    eggNOGi COG1761.
    HOGENOMi HOG000179862.
    KOi K03056.
    OMAi YTIEHPI.

    Enzyme and pathway databases

    BioCyci SSOL273057:GCH2-283-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q980K0.

    Family and domain databases

    HAMAPi MF_00261. RNApol_arch_L.
    InterProi IPR009025. RBP11-like_dimer.
    IPR008193. RNA_pol_Rpb11_13-16kDa_CS.
    IPR022905. RNAP_L.
    [Graphical view ]
    Pfami PF01193. RNA_pol_L. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55257. SSF55257. 1 hit.
    PROSITEi PS01154. RNA_POL_L_13KD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 35092 / DSM 1617 / JCM 11322 / P2.
    2. "The X-ray crystal structure of RNA polymerase from Archaea."
      Hirata A., Klein B.J., Murakami K.S.
      Nature 451:851-854(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.4 ANGSTROMS) OF THE RNA POLYMERASE COMPLEX.

    Entry informationi

    Entry nameiRPOL_SULSO
    AccessioniPrimary (citable) accession number: Q980K0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 27, 2002
    Last sequence update: October 1, 2001
    Last modified: October 1, 2014
    This is version 76 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3