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Q980K0

- RPOL_SULSO

UniProt

Q980K0 - RPOL_SULSO

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Protein

DNA-directed RNA polymerase subunit L

Gene

rpoL

Organism
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. DNA-directed RNA polymerase activity Source: UniProtKB-KW

GO - Biological processi

  1. transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Nucleotidyltransferase, Transferase

Keywords - Biological processi

Transcription

Enzyme and pathway databases

BioCyciSSOL273057:GCH2-283-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
Gene namesi
Name:rpoL
Ordered Locus Names:SSO5577
OrganismiSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Taxonomic identifieri273057 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
ProteomesiUP000001974: Chromosome

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymerase

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9292DNA-directed RNA polymerase subunit LPRO_0000149339Add
BLAST

Interactioni

Protein-protein interaction databases

DIPiDIP-60647N.
STRINGi273057.SSO5577.

Structurei

Secondary structure

1
92
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi2 – 98
Beta strandi12 – 187
Helixi22 – 3312
Beta strandi38 – 447
Beta strandi48 – 503
Beta strandi53 – 597
Beta strandi61 – 633
Helixi65 – 9127

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PA8X-ray1.76L1-92[»]
2PMZX-ray3.40L/X1-92[»]
3HKZX-ray3.40L/V1-92[»]
ProteinModelPortaliQ980K0.
SMRiQ980K0. Positions 1-92.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ980K0.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1761.
HOGENOMiHOG000179862.
InParanoidiQ980K0.
KOiK03056.
OMAiYTIEHPI.

Family and domain databases

HAMAPiMF_00261. RNApol_arch_L.
InterProiIPR009025. RBP11-like_dimer.
IPR008193. RNA_pol_Rpb11_13-16kDa_CS.
IPR022905. RNAP_L.
[Graphical view]
PfamiPF01193. RNA_pol_L. 1 hit.
[Graphical view]
SUPFAMiSSF55257. SSF55257. 1 hit.
PROSITEiPS01154. RNA_POL_L_13KD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q980K0 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEIRILKSES NYLELEIEGE DHTLGNLIAG TLRRISGVSF ASYYQPHPLS
60 70 80 90
DKIIVKILTD GSITPKDALL KAIENIRGMT SHYIDEIKGL TK
Length:92
Mass (Da):10,285
Last modified:October 1, 2001 - v1
Checksum:iB8F3DDA07598088C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE006641 Genomic DNA. Translation: AAK40631.1.
PIRiH90171.
RefSeqiNP_341841.1. NC_002754.1.

Genome annotation databases

EnsemblBacteriaiAAK40631; AAK40631; SSO5577.
GeneIDi1455441.
KEGGisso:SSO5577.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE006641 Genomic DNA. Translation: AAK40631.1 .
PIRi H90171.
RefSeqi NP_341841.1. NC_002754.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2PA8 X-ray 1.76 L 1-92 [» ]
2PMZ X-ray 3.40 L/X 1-92 [» ]
3HKZ X-ray 3.40 L/V 1-92 [» ]
ProteinModelPortali Q980K0.
SMRi Q980K0. Positions 1-92.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-60647N.
STRINGi 273057.SSO5577.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAK40631 ; AAK40631 ; SSO5577 .
GeneIDi 1455441.
KEGGi sso:SSO5577.

Phylogenomic databases

eggNOGi COG1761.
HOGENOMi HOG000179862.
InParanoidi Q980K0.
KOi K03056.
OMAi YTIEHPI.

Enzyme and pathway databases

BioCyci SSOL273057:GCH2-283-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q980K0.

Family and domain databases

HAMAPi MF_00261. RNApol_arch_L.
InterProi IPR009025. RBP11-like_dimer.
IPR008193. RNA_pol_Rpb11_13-16kDa_CS.
IPR022905. RNAP_L.
[Graphical view ]
Pfami PF01193. RNA_pol_L. 1 hit.
[Graphical view ]
SUPFAMi SSF55257. SSF55257. 1 hit.
PROSITEi PS01154. RNA_POL_L_13KD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35092 / DSM 1617 / JCM 11322 / P2.
  2. "The X-ray crystal structure of RNA polymerase from Archaea."
    Hirata A., Klein B.J., Murakami K.S.
    Nature 451:851-854(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.4 ANGSTROMS) OF THE RNA POLYMERASE COMPLEX.

Entry informationi

Entry nameiRPOL_SULSO
AccessioniPrimary (citable) accession number: Q980K0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 27, 2002
Last sequence update: October 1, 2001
Last modified: October 29, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3