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Protein

DNA-binding protein SSO0352

Gene

SSO0352

Organism
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciSSOL273057:GCH2-337-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-binding protein SSO0352UniRule annotation
Gene namesi
Ordered Locus Names:SSO0352
OrganismiSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Taxonomic identifieri273057 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000001974 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 118118DNA-binding protein SSO0352PRO_0000121565Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi273057.SSO0352.

Structurei

3D structure databases

ProteinModelPortaliQ980F8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PDCD5 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04179. Archaea.
COG2118. LUCA.
HOGENOMiHOG000194121.
InParanoidiQ980F8.
KOiK06875.
OMAiIREPIDD.

Family and domain databases

Gene3Di1.10.8.140. 1 hit.
HAMAPiMF_00026. dsDNA_bind.
InterProiIPR022889. DNA_bind_arc.
IPR002836. PDCD5-related.
[Graphical view]
PANTHERiPTHR10840. PTHR10840. 1 hit.
PfamiPF01984. dsDNA_bind. 1 hit.
[Graphical view]
PIRSFiPIRSF015730. TFAR19. 1 hit.
SUPFAMiSSF46950. SSF46950. 1 hit.

Sequencei

Sequence statusi: Complete.

Q980F8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTPNSYDDE ELEELLRRKA AQEQKRIEEE RKRKAELESQ KESILRVILT
60 70 80 90 100
PEARQRLTNI KLVKPEFAES LENQLIALAQ SGRIKIPITD EELKQILEQI
110
SQQNRRDFKI QIRERGWK
Length:118
Mass (Da):14,054
Last modified:October 1, 2001 - v1
Checksum:iADE29463BC47A3EC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006641 Genomic DNA. Translation: AAK40684.1.
PIRiE90178.
RefSeqiWP_009990649.1. NC_002754.1.

Genome annotation databases

EnsemblBacteriaiAAK40684; AAK40684; SSO0352.
GeneIDi25403819.
KEGGisso:SSO0352.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006641 Genomic DNA. Translation: AAK40684.1.
PIRiE90178.
RefSeqiWP_009990649.1. NC_002754.1.

3D structure databases

ProteinModelPortaliQ980F8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi273057.SSO0352.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK40684; AAK40684; SSO0352.
GeneIDi25403819.
KEGGisso:SSO0352.

Phylogenomic databases

eggNOGiarCOG04179. Archaea.
COG2118. LUCA.
HOGENOMiHOG000194121.
InParanoidiQ980F8.
KOiK06875.
OMAiIREPIDD.

Enzyme and pathway databases

BioCyciSSOL273057:GCH2-337-MONOMER.

Family and domain databases

Gene3Di1.10.8.140. 1 hit.
HAMAPiMF_00026. dsDNA_bind.
InterProiIPR022889. DNA_bind_arc.
IPR002836. PDCD5-related.
[Graphical view]
PANTHERiPTHR10840. PTHR10840. 1 hit.
PfamiPF01984. dsDNA_bind. 1 hit.
[Graphical view]
PIRSFiPIRSF015730. TFAR19. 1 hit.
SUPFAMiSSF46950. SSF46950. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35092 / DSM 1617 / JCM 11322 / P2.

Entry informationi

Entry nameiY352_SULSO
AccessioniPrimary (citable) accession number: Q980F8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 10, 2002
Last sequence update: October 1, 2001
Last modified: November 11, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.