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Q980A3

- Q980A3_SULSO

UniProt

Q980A3 - Q980A3_SULSO

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Protein
Submitted name:

DNA-directed RNA polymerase, subunit E' (RpoE1)

Gene

rpoE1

Organism
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. DNA-directed RNA polymerase activity Source: UniProtKB-KW
  3. RNA binding Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseImported, Transferase

Keywords - Biological processi

Transcription

Enzyme and pathway databases

BioCyciSSOL273057:GCH2-399-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-directed RNA polymerase, subunit E' (RpoE1)Imported (EC:2.7.7.6Imported)
Gene namesi
Name:rpoE1Imported
Ordered Locus Names:SSO0415Imported
OrganismiSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)Imported
Taxonomic identifieri273057 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
ProteomesiUP000001974: Chromosome

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymeraseImported

Interactioni

Protein-protein interaction databases

DIPiDIP-60644N.
STRINGi273057.SSO0415.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PMZX-ray3.40E/T1-180[»]
3HKZX-ray3.40E/Q1-180[»]
ProteinModelPortaliQ980A3.
SMRiQ980A3. Positions 1-180.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ980A3.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1095.
HOGENOMiHOG000229315.
InParanoidiQ980A3.
KOiK03049.
OMAiKIGLTMR.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.30.1490.120. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR003029. Rbsml_prot_S1_RNA-bd_dom.
IPR005576. RNA_pol_Rpb7_N.
IPR004519. RNAP_E/RPC8.
IPR022967. S1_dom.
[Graphical view]
PfamiPF00575. S1. 1 hit.
PF03876. SHS2_Rpb7-N. 1 hit.
[Graphical view]
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF88798. SSF88798. 1 hit.
TIGRFAMsiTIGR00448. rpoE. 1 hit.
PROSITEiPS50126. S1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q980A3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MYKLIKARSI VRIPPNEFGK PLNEIALNEL RQQYQEKILK DLGLVLAILN
60 70 80 90 100
VKTSEEGILV FGDGATYHEV EFDMITYVPV VQEVVEGEVL QVDNYGIFVN
110 120 130 140 150
LGPMDGLVHI SQITDDTLKY DNVRGIIFGE KSKKVIQKGD KVRARVISVA
160 170 180
STVTGRLPRI ALTMRQPYLG KLEWITQTKK
Length:180
Mass (Da):20,329
Last modified:October 1, 2001 - v1
Checksum:i2351BE9ADA4847C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006641 Genomic DNA. Translation: AAK40742.1.
PIRiG90185.
RefSeqiNP_341952.1. NC_002754.1.

Genome annotation databases

EnsemblBacteriaiAAK40742; AAK40742; SSO0415.
GeneIDi1455552.
KEGGisso:SSO0415.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006641 Genomic DNA. Translation: AAK40742.1 .
PIRi G90185.
RefSeqi NP_341952.1. NC_002754.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2PMZ X-ray 3.40 E/T 1-180 [» ]
3HKZ X-ray 3.40 E/Q 1-180 [» ]
ProteinModelPortali Q980A3.
SMRi Q980A3. Positions 1-180.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-60644N.
STRINGi 273057.SSO0415.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAK40742 ; AAK40742 ; SSO0415 .
GeneIDi 1455552.
KEGGi sso:SSO0415.

Phylogenomic databases

eggNOGi COG1095.
HOGENOMi HOG000229315.
InParanoidi Q980A3.
KOi K03049.
OMAi KIGLTMR.

Enzyme and pathway databases

BioCyci SSOL273057:GCH2-399-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q980A3.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.30.1490.120. 1 hit.
InterProi IPR012340. NA-bd_OB-fold.
IPR003029. Rbsml_prot_S1_RNA-bd_dom.
IPR005576. RNA_pol_Rpb7_N.
IPR004519. RNAP_E/RPC8.
IPR022967. S1_dom.
[Graphical view ]
Pfami PF00575. S1. 1 hit.
PF03876. SHS2_Rpb7-N. 1 hit.
[Graphical view ]
SMARTi SM00316. S1. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF88798. SSF88798. 1 hit.
TIGRFAMsi TIGR00448. rpoE. 1 hit.
PROSITEi PS50126. S1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35092 / DSM 1617 / JCM 11322 / P2Imported.
  2. "The X-ray crystal structure of RNA polymerase from Archaea."
    Hirata A., Klein B.J., Murakami K.S.
    Nature 451:851-854(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.40 ANGSTROMS).

Entry informationi

Entry nameiQ980A3_SULSO
AccessioniPrimary (citable) accession number: Q980A3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: October 29, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3