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Q980A3

- Q980A3_SULSO

UniProt

Q980A3 - Q980A3_SULSO

Protein
Submitted name:

DNA-directed RNA polymerase, subunit E' (RpoE1)

Gene

rpoE1

Organism
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 1 (01 Oct 2001)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. DNA-directed RNA polymerase activity Source: UniProtKB-KW
    3. RNA binding Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: InterPro

    Keywords - Molecular functioni

    NucleotidyltransferaseImported, Transferase

    Keywords - Biological processi

    Transcription

    Enzyme and pathway databases

    BioCyciSSOL273057:GCH2-399-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA-directed RNA polymerase, subunit E' (RpoE1)Imported (EC:2.7.7.6Imported)
    Gene namesi
    Name:rpoE1Imported
    Ordered Locus Names:SSO0415Imported
    OrganismiSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)Imported
    Taxonomic identifieri273057 [NCBI]
    Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
    ProteomesiUP000001974: Chromosome

    Subcellular locationi

    Keywords - Cellular componenti

    DNA-directed RNA polymeraseImported

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-60644N.
    STRINGi273057.SSO0415.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2PMZX-ray3.40E/T1-180[»]
    3HKZX-ray3.40E/Q1-180[»]
    ProteinModelPortaliQ980A3.
    SMRiQ980A3. Positions 1-180.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ980A3.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1095.
    HOGENOMiHOG000229315.
    KOiK03049.
    OMAiKIGLTMR.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    3.30.1490.120. 1 hit.
    InterProiIPR012340. NA-bd_OB-fold.
    IPR003029. Rbsml_prot_S1_RNA-bd_dom.
    IPR022967. RNA-binding_domain_S1.
    IPR005576. RNA_pol_Rpb7_N.
    IPR004519. RNAP_E/RPC8.
    [Graphical view]
    PfamiPF00575. S1. 1 hit.
    PF03876. SHS2_Rpb7-N. 1 hit.
    [Graphical view]
    SMARTiSM00316. S1. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    SSF88798. SSF88798. 1 hit.
    TIGRFAMsiTIGR00448. rpoE. 1 hit.
    PROSITEiPS50126. S1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q980A3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYKLIKARSI VRIPPNEFGK PLNEIALNEL RQQYQEKILK DLGLVLAILN    50
    VKTSEEGILV FGDGATYHEV EFDMITYVPV VQEVVEGEVL QVDNYGIFVN 100
    LGPMDGLVHI SQITDDTLKY DNVRGIIFGE KSKKVIQKGD KVRARVISVA 150
    STVTGRLPRI ALTMRQPYLG KLEWITQTKK 180
    Length:180
    Mass (Da):20,329
    Last modified:October 1, 2001 - v1
    Checksum:i2351BE9ADA4847C7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006641 Genomic DNA. Translation: AAK40742.1.
    PIRiG90185.
    RefSeqiNP_341952.1. NC_002754.1.

    Genome annotation databases

    EnsemblBacteriaiAAK40742; AAK40742; SSO0415.
    GeneIDi1455552.
    KEGGisso:SSO0415.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006641 Genomic DNA. Translation: AAK40742.1 .
    PIRi G90185.
    RefSeqi NP_341952.1. NC_002754.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2PMZ X-ray 3.40 E/T 1-180 [» ]
    3HKZ X-ray 3.40 E/Q 1-180 [» ]
    ProteinModelPortali Q980A3.
    SMRi Q980A3. Positions 1-180.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-60644N.
    STRINGi 273057.SSO0415.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAK40742 ; AAK40742 ; SSO0415 .
    GeneIDi 1455552.
    KEGGi sso:SSO0415.

    Phylogenomic databases

    eggNOGi COG1095.
    HOGENOMi HOG000229315.
    KOi K03049.
    OMAi KIGLTMR.

    Enzyme and pathway databases

    BioCyci SSOL273057:GCH2-399-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q980A3.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    3.30.1490.120. 1 hit.
    InterProi IPR012340. NA-bd_OB-fold.
    IPR003029. Rbsml_prot_S1_RNA-bd_dom.
    IPR022967. RNA-binding_domain_S1.
    IPR005576. RNA_pol_Rpb7_N.
    IPR004519. RNAP_E/RPC8.
    [Graphical view ]
    Pfami PF00575. S1. 1 hit.
    PF03876. SHS2_Rpb7-N. 1 hit.
    [Graphical view ]
    SMARTi SM00316. S1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    SSF88798. SSF88798. 1 hit.
    TIGRFAMsi TIGR00448. rpoE. 1 hit.
    PROSITEi PS50126. S1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 35092 / DSM 1617 / JCM 11322 / P2Imported.
    2. "The X-ray crystal structure of RNA polymerase from Archaea."
      Hirata A., Klein B.J., Murakami K.S.
      Nature 451:851-854(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.40 ANGSTROMS).

    Entry informationi

    Entry nameiQ980A3_SULSO
    AccessioniPrimary (citable) accession number: Q980A3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2001
    Last sequence update: October 1, 2001
    Last modified: October 1, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3