Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

DNA-directed RNA polymerase, subunit E' (RpoE1)

Gene

rpoE1

Organism
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseImported, Transferase

Keywords - Biological processi

Transcription

Enzyme and pathway databases

BioCyciSSOL273057:GCH2-399-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-directed RNA polymerase, subunit E' (RpoE1)Imported (EC:2.7.7.6Imported)
Gene namesi
Name:rpoE1Imported
Ordered Locus Names:SSO0415Imported
OrganismiSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)Imported
Taxonomic identifieri273057 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
ProteomesiUP000001974 Componenti: Chromosome

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymeraseImported

Interactioni

Protein-protein interaction databases

DIPiDIP-60644N.
STRINGi273057.SSO0415.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PMZX-ray3.40E/T1-180[»]
3HKZX-ray3.40E/Q1-180[»]
ProteinModelPortaliQ980A3.
SMRiQ980A3. Positions 1-180.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ980A3.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1095.
HOGENOMiHOG000229315.
InParanoidiQ980A3.
KOiK03049.
OMAiKIGLTMR.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.30.1490.120. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR003029. Rbsml_prot_S1_RNA-bd_dom.
IPR005576. RNA_pol_Rpb7_N.
IPR004519. RNAP_E/RPC8.
IPR022967. S1_dom.
[Graphical view]
PfamiPF00575. S1. 1 hit.
PF03876. SHS2_Rpb7-N. 1 hit.
[Graphical view]
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF88798. SSF88798. 1 hit.
TIGRFAMsiTIGR00448. rpoE. 1 hit.
PROSITEiPS50126. S1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q980A3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYKLIKARSI VRIPPNEFGK PLNEIALNEL RQQYQEKILK DLGLVLAILN
60 70 80 90 100
VKTSEEGILV FGDGATYHEV EFDMITYVPV VQEVVEGEVL QVDNYGIFVN
110 120 130 140 150
LGPMDGLVHI SQITDDTLKY DNVRGIIFGE KSKKVIQKGD KVRARVISVA
160 170 180
STVTGRLPRI ALTMRQPYLG KLEWITQTKK
Length:180
Mass (Da):20,329
Last modified:October 1, 2001 - v1
Checksum:i2351BE9ADA4847C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006641 Genomic DNA. Translation: AAK40742.1.
PIRiG90185.
RefSeqiNP_341952.1. NC_002754.1.
WP_009988767.1. NC_002754.1.

Genome annotation databases

EnsemblBacteriaiAAK40742; AAK40742; SSO0415.
GeneIDi1455552.
KEGGisso:SSO0415.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006641 Genomic DNA. Translation: AAK40742.1.
PIRiG90185.
RefSeqiNP_341952.1. NC_002754.1.
WP_009988767.1. NC_002754.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PMZX-ray3.40E/T1-180[»]
3HKZX-ray3.40E/Q1-180[»]
ProteinModelPortaliQ980A3.
SMRiQ980A3. Positions 1-180.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-60644N.
STRINGi273057.SSO0415.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK40742; AAK40742; SSO0415.
GeneIDi1455552.
KEGGisso:SSO0415.

Phylogenomic databases

eggNOGiCOG1095.
HOGENOMiHOG000229315.
InParanoidiQ980A3.
KOiK03049.
OMAiKIGLTMR.

Enzyme and pathway databases

BioCyciSSOL273057:GCH2-399-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ980A3.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.30.1490.120. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR003029. Rbsml_prot_S1_RNA-bd_dom.
IPR005576. RNA_pol_Rpb7_N.
IPR004519. RNAP_E/RPC8.
IPR022967. S1_dom.
[Graphical view]
PfamiPF00575. S1. 1 hit.
PF03876. SHS2_Rpb7-N. 1 hit.
[Graphical view]
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF88798. SSF88798. 1 hit.
TIGRFAMsiTIGR00448. rpoE. 1 hit.
PROSITEiPS50126. S1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35092 / DSM 1617 / JCM 11322 / P2Imported.
  2. "The X-ray crystal structure of RNA polymerase from Archaea."
    Hirata A., Klein B.J., Murakami K.S.
    Nature 451:851-854(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.40 ANGSTROMS).

Entry informationi

Entry nameiQ980A3_SULSO
AccessioniPrimary (citable) accession number: Q980A3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: May 27, 2015
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.