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Q97ZX7 (RPOP_SULSO) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
DNA-directed RNA polymerase subunit P

EC=2.7.7.6
Gene names
Name:rpoP
Ordered Locus Names:SSO5865
OrganismSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) [Reference proteome] [HAMAP]
Taxonomic identifier273057 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus

Protein attributes

Sequence length48 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. HAMAP-Rule MF_00615

Catalytic activity

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). HAMAP-Rule MF_00615

Sequence similarities

Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family.

Ontologies

Keywords
   Biological processTranscription
   Cellular componentDNA-directed RNA polymerase
   DomainZinc-finger
   LigandMetal-binding
Zinc
   Molecular functionNucleotidyltransferase
Transferase
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranscription, DNA-templated

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

DNA-directed RNA polymerase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

metal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 4848DNA-directed RNA polymerase subunit P HAMAP-Rule MF_00615
PRO_0000159767

Regions

Zinc finger6 – 2924C4-type Potential

Secondary structure

....... 48
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q97ZX7 [UniParc].

Last modified October 1, 2001. Version 1.
Checksum: C822E342B8BEFF21

FASTA485,597
        10         20         30         40 
MAVYRCGKCW KTFTDEQLKV LPGVRCPYCG YKIIFMVRKP TIKIVKAI 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE006641 Genomic DNA. Translation: AAK40770.1.
PIRC90189.
RefSeqNP_341980.1. NC_002754.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2PMZX-ray3.40P/Z1-48[»]
3HKZX-ray3.40P/X1-48[»]
ProteinModelPortalQ97ZX7.
SMRQ97ZX7. Positions 6-48.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-60645N.
STRING273057.SSO5865.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAK40770; AAK40770; SSO5865.
GeneID1455580.
KEGGsso:SSO5865.

Phylogenomic databases

eggNOGCOG1996.
HOGENOMHOG000222612.
KOK03059.
OMAPLISCAR.

Enzyme and pathway databases

BioCycSSOL273057:GCH2-427-MONOMER.

Family and domain databases

Gene3D2.20.28.30. 1 hit.
HAMAPMF_00615. RNApol_arch_P.
InterProIPR023464. RNAP_P.
IPR006591. RNAP_P/RPABC4.
IPR029040. RPABC4/Spt4.
[Graphical view]
PfamPF03604. DNA_RNApol_7kD. 1 hit.
[Graphical view]
SMARTSM00659. RPOLCX. 1 hit.
[Graphical view]
SUPFAMSSF63393. SSF63393. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ97ZX7.

Entry information

Entry nameRPOP_SULSO
AccessionPrimary (citable) accession number: Q97ZX7
Entry history
Integrated into UniProtKB/Swiss-Prot: February 12, 2003
Last sequence update: October 1, 2001
Last modified: June 11, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references