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Q97ZJ9 (RPOK_SULSO) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 82. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
DNA-directed RNA polymerase subunit K

EC=2.7.7.6
Gene names
Name:rpoK
Ordered Locus Names:SSO6768
OrganismSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) [Reference proteome] [HAMAP]
Taxonomic identifier273057 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus

Protein attributes

Sequence length95 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. HAMAP-Rule MF_00192

Catalytic activity

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). HAMAP-Rule MF_00192

Sequence similarities

Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family.

Ontologies

Keywords
   Biological processTranscription
   Cellular componentDNA-directed RNA polymerase
   Molecular functionNucleotidyltransferase
Transferase
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranscription, DNA-templated

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

DNA-directed RNA polymerase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 9595DNA-directed RNA polymerase subunit K HAMAP-Rule MF_00192
PRO_0000133823

Secondary structure

............... 95
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q97ZJ9 [UniParc].

Last modified August 14, 2001. Version 1.
Checksum: 2EA09FA9B1EAF55A

FASTA9510,858
        10         20         30         40         50         60 
MGLERDEILS QDLHFNEVFI SLWQNRLTRY EIARVISARA LQLAMGAPAL IDINNLSSTD 

        70         80         90 
VISIAEEEFR RGVLPITIRR RLPNGKIILL SLRKS 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE006641 Genomic DNA. Translation: AAK41189.1.
PIRF90241.
RefSeqNP_342399.1. NC_002754.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2PMZX-ray3.40K/W1-95[»]
3HKZX-ray3.40K/U1-95[»]
ProteinModelPortalQ97ZJ9.
SMRQ97ZJ9. Positions 11-92.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-60642N.
STRING273057.SSO6768.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAK41189; AAK41189; SSO6768.
GeneID1455156.
KEGGsso:SSO6768.

Phylogenomic databases

eggNOGCOG1758.
HOGENOMHOG000225272.
KOK03055.
OMAKRDFYPP.
ProtClustDBPRK01099.

Enzyme and pathway databases

BioCycSSOL273057:GCH2-864-MONOMER.

Family and domain databases

Gene3D3.90.940.10. 1 hit.
HAMAPMF_00192. RNApol_arch_K.
InterProIPR020708. DNA-dir_RNA_polK_14-18kDa_CS.
IPR006110. Pol_omega/K/RPB6.
IPR012293. RNAP_RPB6_omega.
IPR006111. RpoK/Rpb6.
[Graphical view]
PANTHERPTHR10773. PTHR10773. 1 hit.
PfamPF01192. RNA_pol_Rpb6. 1 hit.
[Graphical view]
PIRSFPIRSF000778. RpoK/RPB6. 1 hit.
SUPFAMSSF63562. SSF63562. 1 hit.
PROSITEPS01111. RNA_POL_K_14KD. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ97ZJ9.

Entry information

Entry nameRPOK_SULSO
AccessionPrimary (citable) accession number: Q97ZJ9
Entry history
Integrated into UniProtKB/Swiss-Prot: August 14, 2001
Last sequence update: August 14, 2001
Last modified: March 19, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references