Q97TI6 (Q97TI6_CLOAB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-1,4-beta-xylanase XynD B.subtilis ortholog (Family 43 glycosyl hydrolase and cellulose-binding domain) EMBL AAK76860.1

Gene names

Name:	xynD EMBL AAK76860.1
Ordered Locus Names:	CA_P0115

Encoded on

Plasmid pSOL1 EMBL AAK76860.1

Organism

Clostridium acetobutylicum

Taxonomic identifier

1488 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	458 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Xylan degradation EMBL AAK76860.1
Molecular function	Hydrolase EMBL AAK76860.1
Technical term	Complete proteome Plasmid EMBL AAK76860.1 Reference proteome
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q97TI6 [UniParc]. Last modified October 1, 2001. Version 1. Checksum: 340C2A57E7AF7F50	FASTA	458	50,154
	10 20 30 40 50 60 MKKASYIMAF SLAFALVSPV ACHADNPVVQ TLYTTDPAPM VYNGTCYLYT GHDEDGSTWY 70 80 90 100 110 120 TMKDWRCYSS TDMVNWTDNG SPLAYNTFSW AKGDAWAGQC IPRNGKFYYY VPVTQKSGGM 130 140 150 160 170 180 AIGVAVSNSP TGPFVDALGH PLAYTGTGDI DPTVFIDNDG QAYLYWGNPN LYYVKLNQDM 190 200 210 220 230 240 ISYSGKIVQV PLTTAGFGVR KGNSSRPTLY EEGPWFYKRN GMYYMVYAAG GIPEYISYST 250 260 270 280 290 300 SKSPTGPWYY KGVIMPSQGR SFTNHPGVID FKGNSYFFYH NGALPGGSGF TRSVCIEQFK 310 320 330 340 350 360 YNADGTFPTI NMTTTGVSGI GNLNPYTQNE AETICWESNV KTEKCSEGGM DVCNIQNNSW 370 380 390 400 410 420 IKVKGVNFDS GAASFNARVA SATNGGNIEL HLDSPSGTLI GTCHVNSTGG WQSWVTNSCN 430 440 450 VSGAKGIHDL YLKFTGGNGY LFNVNWWKFN GTKTVSTR

References

[1]

"Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum." Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R., Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F., Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V., Smith D.R. J. Bacteriol. 183:4823-4838(2001) [PubMed: 11466286] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE001438 Genomic DNA. Translation: AAK76860.1.
RefSeq	NP_149278.1. NC_001988.2.
3D structure databases
HSSP	HSSP built from PDB template 1GMM based on UniProtKB O52780.
ProteinModelPortal	Q97TI6.
ModBase	Search...
Protein family/group databases
CAZy	CBM6. Carbohydrate-Binding Module Family 6. GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1116120.
GenomeReviews	Gene locus CA_P0115 in contig AE001438_GR.
KEGG	cac:CA_P0115.
NMPDR	fig|272562.1.peg.113.
PATRIC	32034114. VBICloAce74127_0115.
Phylogenomic databases
HOGENOM	HBG585375.
OMA	ALITNDM.
Family and domain databases
InterPro	IPR006584. Cellulose-bd_IV. IPR005084. CMB_fam6. IPR008979. Galactose-bd-like. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF03422. CBM_6. 1 hit. PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SMART	SM00606. CBD_IV. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
PROSITE	PS51175. CBM6. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q97TI6_CLOAB

Accession

Primary (citable) accession number: Q97TI6

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2001
Last sequence update:	October 1, 2001
Last modified:	December 14, 2011
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)