Q97TF3 (Q97TF3_CLOAB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Lysozyme RuleBase RU003788
EC=3.2.1.17 RuleBase RU003788

Gene names

Ordered Locus Names:

CA_P0151

Encoded on

Plasmid pSOL1 EMBL AAK76896.1

Organism

Clostridium acetobutylicum

Taxonomic identifier

1488 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	752 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. RuleBase RU003788
Sequence similarities	Belongs to the glycosyl hydrolase 24 family. RuleBase RU003788

Ontologies

Keywords
Molecular function	Antimicrobial Bacteriolytic enzyme RuleBase RU003788 Glycosidase RuleBase RU003788 Hydrolase Integrin EMBL AAK76896.1
Technical term	Complete proteome Plasmid EMBL AAK76896.1 Reference proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro cytolysis Inferred from electronic annotation. Source: UniProtKB-KW defense response to bacterium Inferred from electronic annotation. Source: UniProtKB-KW integrin-mediated signaling pathway Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	lysozyme activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q97TF3 [UniParc]. Last modified October 1, 2001. Version 1. Checksum: 926411C779BBBA5A	FASTA	752	83,962
	10 20 30 40 50 60 MLFLGLLFAY MSKCNIYADT KSITLNPSVA TTLGKTDNTW TFQVGDYNND GVPDLYGISK 70 80 90 100 110 120 QGTNSTEVHV LDGKSNYRKF LLQTAIPIEK TGDNYDFKLG DYNNDGVPDL YCIKKNGSNG 130 140 150 160 170 180 KTEVHILNGK DNFHSFLAEV ATALPATDNN WSFSIGDYNH DGTPDLYCIK KNGANGKTEL 190 200 210 220 230 240 HILNGKNNFQ SFLYEVGTTL PQTDNNWDFG VSDYNADGAL DLYCIKKNGS GATEVHILDG 250 260 270 280 290 300 KSNFKSFAFE IGTPMTPTDE NTQFILGQGS MNIYAIKKQG ATATEVQQLG YKDTPNTSND 310 320 330 340 350 360 SNSNTSTKVN TAPINTNGIN WKSHFSTALG KTDDTWTFQM GDYNRDGVLD LYGIRKQGTT 370 380 390 400 410 420 STEVHVLDGK SNYRKFLLQT VIPIEKTGDN YDFKLSDYNN DGIPDLYCIK KNGANGRTEV 430 440 450 460 470 480 HVLNGKDNFH SFFSEVSTAL PSTDNNWDFC IGNYNNDEKP DLYCIKKNGA NGKTEVHILN 490 500 510 520 530 540 GKTNFQSFLL EIGTSLSNTD DNWNFGLNDY NNDGLIDLYC IKRNGSGATE IHILNGKNNF 550 560 570 580 590 600 SSFNFESATP MEPTDKNTQF IVSNDGALNV YPIKKQGATS TEVHEFGTKS QDHDKNYNNS 610 620 630 640 650 660 SNLITFIGQY ESFSPVPYRG ADYQNRTIGY GHVIQPGENL SYLTDEQARD LLQRDIQNTT 670 680 690 700 710 720 NAVSSITSGL KLTQNQFDSL VDFAYNCGIS ALESSILLKN IKAGNTSADT LKTNFISWSY 730 740 750 CNGEELLGLW RRRMDEWQMY EYSDYNRDYP NW

References

[1]

"Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum." Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R., Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F., Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V., Smith D.R. J. Bacteriol. 183:4823-4838(2001) [PubMed: 11466286] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE001438 Genomic DNA. Translation: AAK76896.1.
RefSeq	NP_149314.1. NC_001988.2.
3D structure databases
ProteinModelPortal	Q97TF3.
ModBase	Search...
Protein family/group databases
CAZy	GH24. Glycoside Hydrolase Family 24.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1116156.
GenomeReviews	Gene locus CA_P0151 in contig AE001438_GR.
KEGG	cac:CA_P0151.
NMPDR	fig|272562.1.peg.149.
PATRIC	32034188. VBICloAce74127_0152.
Family and domain databases
InterPro	IPR002196. Glyco_hydro_24. IPR023346. Lysozyme-like_dom. IPR023347. Lysozyme_dom. [Graphical view]
Gene3D	G3DSA:1.10.530.40. G3DSA:1.10.530.40. 1 hit.
Pfam	PF00959. Phage_lysozyme. 1 hit. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q97TF3_CLOAB

Accession

Primary (citable) accession number: Q97TF3

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2001
Last sequence update:	October 1, 2001
Last modified:	December 14, 2011
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)