Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

UPF0210 protein SP_0239

Gene

SP_0239

Organism
Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciSPNE170187:GHGN-235-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0210 protein SP_0239
Gene namesi
Ordered Locus Names:SP_0239
OrganismiStreptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Taxonomic identifieri170187 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000000585 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000705611 – 445UPF0210 protein SP_0239Add BLAST445

Interactioni

Subunit structurei

Homodimer.1 Publication

Protein-protein interaction databases

IntActiQ97ST4. 1 interactor.
STRINGi170187.SpneT_02000070.

Structurei

Secondary structure

1445
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi3 – 15Combined sources13
Beta strandi20 – 27Combined sources8
Helixi30 – 32Combined sources3
Helixi37 – 51Combined sources15
Turni52 – 54Combined sources3
Helixi55 – 66Combined sources12
Beta strandi70 – 78Combined sources9
Helixi80 – 85Combined sources6
Helixi93 – 106Combined sources14
Beta strandi109 – 117Combined sources9
Helixi126 – 138Combined sources13
Beta strandi141 – 148Combined sources8
Turni152 – 154Combined sources3
Beta strandi155 – 157Combined sources3
Helixi158 – 172Combined sources15
Helixi178 – 181Combined sources4
Beta strandi182 – 187Combined sources6
Beta strandi206 – 213Combined sources8
Helixi216 – 224Combined sources9
Turni225 – 228Combined sources4
Helixi231 – 260Combined sources30
Beta strandi262 – 267Combined sources6
Helixi281 – 287Combined sources7
Helixi298 – 314Combined sources17
Helixi334 – 341Combined sources8
Helixi347 – 353Combined sources7
Beta strandi363 – 366Combined sources4
Helixi372 – 389Combined sources18
Beta strandi393 – 399Combined sources7
Helixi427 – 431Combined sources5
Beta strandi434 – 436Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2HA9X-ray2.70A/B1-445[»]
ProteinModelPortaliQ97ST4.
SMRiQ97ST4.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ97ST4.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0210 family.Curated

Phylogenomic databases

eggNOGiENOG4105CAG. Bacteria.
COG2848. LUCA.
HOGENOMiHOG000059201.
KOiK09157.
OMAiEAMTSVC.

Family and domain databases

CDDicd08025. RNR_PFL_like_DUF711. 1 hit.
HAMAPiMF_01221. UPF0210. 1 hit.
InterProiIPR007841. UPF0210.
[Graphical view]
PfamiPF05167. DUF711. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q97ST4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDIRQVTETI AMIEEQNFDI RTITMGISLL DCIDPDINRA AEKIYQKITT
60 70 80 90 100
KAANLVAVGD EIAAELGIPI VNKRVSVTPI SLIGAATDAT DYVVLAKALD
110 120 130 140 150
KAAKEIGVDF IGGFSALVQK GYQKGDEILI NSIPRALAET DKVCSSVNIG
160 170 180 190 200
STKSGINMTA VADMGRIIKE TANLSDMGVA KLVVFANAVE DNPFMAGAFH
210 220 230 240 250
GVGEADVIIN VGVSGPGVVK RALEKVRGQS FDVVAETVKK TAFKITRIGQ
260 270 280 290 300
LVGQMASERL GVEFGIVDLS LAPTPAVGDS VARVLEEMGL ETVGTHGTTA
310 320 330 340 350
ALALLNDQVK KGGVMACNQV GGLSGAFIPV SEDEGMIAAV QNGSLNLEKL
360 370 380 390 400
EAMTAICSVG LDMIAIPEDT PAETIAAMIA DEAAIGVINM KTTAVRIIPK
410 420 430 440
GKEGDMIEFG GLLGTAPVMK VNGASSVDFI SRGGQIPAPI HSFKN
Length:445
Mass (Da):46,354
Last modified:October 1, 2001 - v1
Checksum:iF6B6E30D3E206075
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005672 Genomic DNA. Translation: AAK74419.1.
PIRiB95028.
RefSeqiWP_000354896.1. NZ_AKVY01000001.1.

Genome annotation databases

EnsemblBacteriaiAAK74419; AAK74419; SP_0239.
KEGGispn:SP_0239.
PATRICi19704803. VBIStrPne105772_0247.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005672 Genomic DNA. Translation: AAK74419.1.
PIRiB95028.
RefSeqiWP_000354896.1. NZ_AKVY01000001.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2HA9X-ray2.70A/B1-445[»]
ProteinModelPortaliQ97ST4.
SMRiQ97ST4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ97ST4. 1 interactor.
STRINGi170187.SpneT_02000070.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK74419; AAK74419; SP_0239.
KEGGispn:SP_0239.
PATRICi19704803. VBIStrPne105772_0247.

Phylogenomic databases

eggNOGiENOG4105CAG. Bacteria.
COG2848. LUCA.
HOGENOMiHOG000059201.
KOiK09157.
OMAiEAMTSVC.

Enzyme and pathway databases

BioCyciSPNE170187:GHGN-235-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ97ST4.

Family and domain databases

CDDicd08025. RNR_PFL_like_DUF711. 1 hit.
HAMAPiMF_01221. UPF0210. 1 hit.
InterProiIPR007841. UPF0210.
[Graphical view]
PfamiPF05167. DUF711. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY239_STRPN
AccessioniPrimary (citable) accession number: Q97ST4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 19, 2002
Last sequence update: October 1, 2001
Last modified: November 2, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.