Hydrolase, haloacid dehalogenase-like family - Streptococcus pneumoniae TIGR4

Preferred order of sections

Names and origin

Protein names

Submitted name:
Hydrolase, haloacid dehalogenase-like family EMBL AAK74942.1

Gene names

Ordered Locus Names:

SP_0805

Organism

Streptococcus pneumoniae TIGR4 [Complete proteome] EMBL AAK74942.1

Taxonomic identifier

170187 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Streptococcaceae › Streptococcus

Protein attributes

Sequence length	190 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Calcium PDB 2FI1 Metal-binding PDB 2FI1
Molecular function	Hydrolase EMBL AAK74942.1
Technical term	3D-structure PDB 2FI1 Complete proteome
Gene Ontology (GO)
Molecular function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW phosphoglycolate phosphatase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

12

1

Calcium PDB 2FI1

Metal binding

14

1

Calcium; via carbonyl oxygen PDB 2FI1

Metal binding

160

1

Calcium PDB 2FI1

Sequences

Sequence

Length

Mass (Da)

Tools

Q97RK1 [UniParc].

Last modified October 1, 2001. Version 1.
Checksum: CBBD5A0661AF543E
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FASTA

190

21,450

        10         20         30         40         50         60 
MKGMKYHDYI WDLGGTLLDN YETSTAAFVE TLALYGITQD HDSVYQALKV STPFAIETFA 

        70         80         90        100        110        120 
PNLENFLEKY KENEARELEH PILFEGVSDL LEDISNQGGR HFLVSHRNDQ VLEILEKTSI 

       130        140        150        160        170        180 
AAYFTEVVTS SSGFKRKPNP ESMLYLREKY QISSGLVIGD RPIDIEAGQA AGLDTHLFTS 

       190 
IVNLRQVLDI

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References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of a virulent isolate of Streptococcus pneumoniae." Tettelin H., Nelson K.E., Paulsen I.T., Eisen J.A., Read T.D., Peterson S., Heidelberg J., DeBoy R.T., Haft D.H., Dodson R.J., Durkin A.S., Gwinn M., Kolonay J.F., Nelson W.C., Peterson J.D., Umayam L.A., White O., Salzberg S.L. Fraser C.M. Science 293:498-506(2001) [PubMed: 11463916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-334 / TIGR4.
[2]	"The 1.4A crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4." Zhang R., Zhou M., Abdullah J., Collart F., Joachimiak A. Submitted (DEC-2005) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS) IN COMPLEX WITH CALCIUM.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE005672 Genomic DNA. Translation: AAK74942.1.

PIR

E95093.

RefSeq

NP_345302.1. NC_003028.3.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2FI1	X-ray	1.40	A	1-190	[»]

ProteinModelPortal

Q97RK1.

SMR

Q97RK1. Positions 4-190.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

EBSTRT00000025886; EBSTRP00000024978; EBSTRG00000025886.

GeneID

930755.

GenomeReviews

Gene locus SP_0805 in contig AE005672_GR.

KEGG

spn:SP_0805.

PATRIC

19705981. VBIStrPne105772_0837.

TIGR

SP_0805.

Phylogenomic databases

GeneTree

EBGT00050000027148.

HOGENOM

HBG698756.

OMA

SYFTEVV.

ProtClustDB

CLSK876802.

Enzyme and pathway databases

BioCyc

SPNE170187-1:SP_0805-MONOMER.

Family and domain databases

InterPro

IPR005834. Dehalogen-like_hydro.
IPR023214. HAD-like_dom.
IPR006439. HAD-SF_hydro_IA_v1.
[Graphical view]

Gene3D

G3DSA:3.40.50.1000. HAD-like_dom. 2 hits.

Pfam

PF00702. Hydrolase. 1 hit.
[Graphical view]

SUPFAM

SSF56784. HAD-like_dom. 1 hit.

TIGRFAMs

TIGR01549. HAD-SF-IA-v1. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q97RK1_STRPN

Accession

Primary (citable) accession number: Q97RK1

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2001
Last sequence update:	October 1, 2001
Last modified:	January 25, 2012
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)