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Protein

UPF0342 protein SP_1372

Gene

SP_1372

Organism
Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciSPNE170187:GHGN-1298-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0342 protein SP_1372UniRule annotation
Gene namesi
Ordered Locus Names:SP_1372
OrganismiStreptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Taxonomic identifieri170187 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000000585 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001099941 – 112UPF0342 protein SP_1372Add BLAST112

Structurei

Secondary structure

1112
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi1 – 16Combined sources16
Helixi19 – 33Combined sources15
Helixi35 – 47Combined sources13
Helixi48 – 50Combined sources3
Turni51 – 54Combined sources4
Helixi63 – 77Combined sources15
Helixi80 – 108Combined sources29

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2IAZX-ray2.40A/B/C/D1-112[»]
ProteinModelPortaliQ97Q59.
SMRiQ97Q59.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ97Q59.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0342 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG3679. LUCA.
HOGENOMiHOG000284933.
OMAiISEPITE.

Family and domain databases

Gene3Di1.20.1500.10. 1 hit.
HAMAPiMF_01526. UPF0342. 1 hit.
InterProiView protein in InterPro
IPR010368. Com_YlbF.
IPR023378. YheA/YmcA-like_dom.
PfamiView protein in Pfam
PF06133. Com_YlbF. 1 hit.
SUPFAMiSSF158622. SSF158622. 1 hit.

Sequencei

Sequence statusi: Complete.

Q97Q59-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNIYDSANE LSRGLRGLPE YKAVKAAKDA IAADAEASKI FTDYLAFQEE
60 70 80 90 100
IQKLAQTGQM PDASFQAKME GFGKQIQGNS LLSEFFTKQQ QLAIYLSDIE
110
KIVFEPVSEL LK
Length:112
Mass (Da):12,457
Last modified:October 1, 2001 - v1
Checksum:i0ACB9EEEA61D4865
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005672 Genomic DNA. Translation: AAK75470.1.
PIRiE95159.
RefSeqiWP_000065987.1. NZ_AKVY01000001.1.

Genome annotation databases

EnsemblBacteriaiAAK75470; AAK75470; SP_1372.
KEGGispn:SP_1372.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiY1372_STRPN
AccessioniPrimary (citable) accession number: Q97Q59
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 4, 2005
Last sequence update: October 1, 2001
Last modified: July 5, 2017
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries