Putative platelet activating factor - Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)

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Q97PY9 (Q97PY9_STRPN) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 62. History...

Clusters with 100%, 90%, 50% identity |

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Putative platelet activating factor EMBL AAK75544.1

Gene names

Ordered Locus Names:

SP_1450

Organism

Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Streptococcus ›

Protein attributes

Sequence length	211 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Magnesium PDB 2HSJ Metal-binding PDB 2HSJ
Technical term	3D-structure PDB 2HSJ Complete proteome
Gene Ontology (GO)
Molecular_function	hydrolase activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

1

Magnesium; via carbonyl oxygen PDB 2HSJ

Metal binding

1

Magnesium; via carbonyl oxygen PDB 2HSJ

Metal binding

1

Magnesium; via carbonyl oxygen PDB 2HSJ

Sequences

Sequence

Length

Mass (Da)

Tools

Q97PY9 [UniParc].

Last modified October 1, 2001. Version 1.
Checksum: 81E055B38197AE51
Show »

211

24,117

        10         20         30         40         50         60 
MAVQLLENWL LKEQEKIQTK YRHLNHISVV EPNILFIGDS IVEYYPLQEL FGTSKTIVNR 

        70         80         90        100        110        120 
GIRGYQTGLL LENLDAHLYG GAVDKIFLLI GTNDIGKDVP VNEALNNLEA IIQSVARDYP 

       130        140        150        160        170        180 
LTEIKLLSIL PVNEREEYQQ AVYIRSNEKI QNWNQAYQEL ASAYMQVEFV PVFDCLTDQA 

       190        200        210 
GQLKKEYTTD GLHLSIAGYQ ALSKSLKDYL Y

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of a virulent isolate of Streptococcus pneumoniae." Tettelin H., Nelson K.E., Paulsen I.T., Eisen J.A., Read T.D., Peterson S.N., Heidelberg J.F., DeBoy R.T., Haft D.H., Dodson R.J., Durkin A.S., Gwinn M.L., Kolonay J.F., Nelson W.C., Peterson J.D., Umayam L.A., White O., Salzberg S.L. Fraser C.M. Science 293:498-506(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-334 / TIGR4.
[2]	"The structure of a putative platelet activating factor from Streptococcus pneumonia." Cuff M.E., Mulligan R., Abdullah J., Joachimiak A. Submitted (JUL-2006) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) IN COMPLEX WITH MAGNESIUM.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE005672 Genomic DNA. Translation: AAK75544.1.

PIR

G95168.
H98034.

RefSeq

NP_345904.1. NC_003028.3.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2HSJ	X-ray	1.50	A/B/C/D	1-211	[»]

ProteinModelPortal

SMR

Q97PY9. Positions 1-211.

ModBase

Protein-protein interaction databases

STRING

170187.SP_1450.

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

AAK75544; AAK75544; SP_1450.

GeneID

KEGG

PATRIC

19707319. VBIStrPne105772_1502.

Organism-specific databases

CMR

Phylogenomic databases

HOGENOM

OMA

ProtClustDB

Family and domain databases

Gene3D

3.40.50.1110. 1 hit.

InterPro

IPR013831. SGNH_hydro-type_esterase_dom.
[Graphical view]

ProtoNet

Other

EvolutionaryTrace

Entry information

Entry name

Q97PY9_STRPN

Accession

Primary (citable) accession number: Q97PY9

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2001
Last sequence update:	October 1, 2001
Last modified:	May 1, 2013
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info