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Protein
Submitted name:

Methyl-accepting chemotaxis protein

Gene

CA_C0543

Organism
Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciCACE272562:GJIH-584-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis proteinImported
Gene namesi
Ordered Locus Names:CA_C0543Imported
OrganismiClostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)Imported
Taxonomic identifieri272562 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000000814 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3221HelicalSequence analysisAdd
BLAST
Transmembranei194 – 21724HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiQ97LL5.

Interactioni

Protein-protein interaction databases

STRINGi272562.CA_C0543.

Structurei

3D structure databases

ProteinModelPortaliQ97LL5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini221 – 27353HAMPInterPro annotationAdd
BLAST
Domaini292 – 549258Methyl-accepting transducerInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili94 – 11421Sequence analysisAdd
BLAST
Coiled coili118 – 14528Sequence analysisAdd
BLAST
Coiled coili468 – 48821Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4108NVR. Bacteria.
ENOG41105ED. LUCA.
OMAiVAFANTV.
OrthoDBiEOG6X6RBP.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q97LL5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSGGIKANL SLLVIFMLIF AVGLGGFSFY SLNNIKSESE KNVATVSKYV
60 70 80 90 100
VLVDGSREAQ VTFKKQVQSW KDLLLRGSDE AKYNTYFKEF TEYNEKVTKQ
110 120 130 140 150
LEELKGTMKE LGLDTNQIDK VSSEINQLQE NYSNALKSYD KNNKDSYKIV
160 170 180 190 200
DALVKGMDRA PTNDMDTLVG SIRKNSETQI ANMKTISENK NKKLAIELFA
210 220 230 240 250
IIAISMCIVG LLTLITLKTY KSIEKFIEQF KALMKKAGDG DLTVEGEVFS
260 270 280 290 300
NNELGDLTIN FNEFIKKIKA LILQTKDLSD LLAASSNEIL RGADETVKTS
310 320 330 340 350
YEIAETISQV ADGATKQSAL ANQGNDMVVN VTKDLNKVTE TTKSMKELAI
360 370 380 390 400
ETDKVLTDGI SSIKTQNEKM EESKKTTKDV SEAILNLSSK SSKIAEFVEV
410 420 430 440 450
INGISSQTNL LALNASIEAA RAGEVGKGFA VVADEIRMLA ESSSTSTTQI
460 470 480 490 500
EELIKVIQSA INETVLKMKK FEKSMEEQIE AIKNTESTFW EIKDSTSKVA
510 520 530 540 550
NKVIDVSNST QVIDENSIAL ERAISNISSV VEQNAAASEE VAASTEEQVS
560 570
SLEEISTLIN DLSKSSDNLK NLLEIYKVK
Length:579
Mass (Da):63,763
Last modified:October 1, 2001 - v1
Checksum:i872CFAE43B1E1598
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001437 Genomic DNA. Translation: AAK78522.1.
PIRiG96966.
RefSeqiNP_347182.1. NC_003030.1.
WP_010963864.1. NC_003030.1.

Genome annotation databases

EnsemblBacteriaiAAK78522; AAK78522; CA_C0543.
GeneIDi1116726.
KEGGicac:CA_C0543.
PATRICi32035449. VBICloAce74127_0746.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001437 Genomic DNA. Translation: AAK78522.1.
PIRiG96966.
RefSeqiNP_347182.1. NC_003030.1.
WP_010963864.1. NC_003030.1.

3D structure databases

ProteinModelPortaliQ97LL5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272562.CA_C0543.

Proteomic databases

PRIDEiQ97LL5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK78522; AAK78522; CA_C0543.
GeneIDi1116726.
KEGGicac:CA_C0543.
PATRICi32035449. VBICloAce74127_0746.

Phylogenomic databases

eggNOGiENOG4108NVR. Bacteria.
ENOG41105ED. LUCA.
OMAiVAFANTV.
OrthoDBiEOG6X6RBP.

Enzyme and pathway databases

BioCyciCACE272562:GJIH-584-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787Imported.

Entry informationi

Entry nameiQ97LL5_CLOAB
AccessioniPrimary (citable) accession number: Q97LL5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: December 9, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.