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Unreviewed, UniProtKB/TrEMBL Q97KW2 (Q97KW2_CLOAB)

Last modified April 14, 2009. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Pectate lyase related protein, secreted EMBL AAK78780.1
Gene names
Ordered Locus Names: CA_C0804
OrganismClostridium acetobutylicum [Complete proteome] [HAMAP]
Taxonomic identifier1488 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length564 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Keywords
   Molecular functionLyase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q97KW2-1 [UniParc].

Last modified October 1, 2001. Version 1.
Checksum: B6B6D64522B356A7

FASTA56461,374
        10         20         30         40         50         60 
MGRRFSKRLL VAILASSMAI SATFSANAST KYGKNYVSSV TKAVETSAVS ILESEGSLES 

        70         80         90        100        110        120 
ANVEWSPVQG AASYNVYYKA ADALDSSYTK IDDELIRQYP SSFRADVLGL AAGNYVLKIV 

       130        140        150        160        170        180 
PVVNGVDAIN EEATTQALTV KANKREGFAF SPASPMKTSS GGYNDDGTVA SNAEILYITA 

       190        200        210        220        230        240 
SNVNTVTENV VTNAKGTKTT CTGLVNILAG RQKGYDKSPL IIRMIGEIKA SDITGLNEHT 

       250        260        270        280        290        300 
YIQLKGCYNV TFEGVGKDAT AYGWGFLIRD ARNLELRNVG IMMFGDDAIS LDTDNQNIWV 

       310        320        330        340        350        360 
HNNDLFYGAA GHDADQVKGD GSCDIKQDST FVSVSYNHFH DSGKSSLCGM QDTQNYYVTY 

       370        380        390        400        410        420 
HHNWFDHSDS RHPRIRVGSV HVYNNYFDGN AKYGVGVTKG ASAFVEANYF RDCKYPMLSS 

       430        440        450        460        470        480 
LQGTDIFYDS KGDFSGEDGG MIKAYNNKIE GATRLVYANQ DPIQFDAYLA SSRNEVVPST 

       490        500        510        520        530        540 
YKTLVGGTTY NNFDTSSVMY KYQPDSPDDV KESVTSYAGR VDGGDLIFNF TDADDTSSVI 

       550        560 
NPDLMAKVKN YSSTLVSDGS KVVK 

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References

[1]"Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum."
Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R., Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F., Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V., Smith D.R.
J. Bacteriol. 183:4823-4838(2001) [PubMed: 11466286] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787.

Cross-references

Sequence databases

AE001437 Genomic DNA. Translation: AAK78780.1.
PIRA96999.
RefSeqNP_347440.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyPL1. Polysaccharide Lyase Family 1.

Genome annotation databases

GeneID1116987.
GenomeReviewsGene locus CA_C0804 in contig AE001437_GR.
KEGGcac:CAC0804.
NMPDRfig|272562.1.peg.969.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ97KW2.

Enzyme and pathway databases

BioCycCACE272562:CAC0804-MON.

Family and domain databases

InterProIPR002022. Amb_allergen.
IPR012334. Pectin_lyas_fold.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF00544. Pec_lyase_C. 1 hit.
[Graphical view]
SMARTSM00656. Amb_all. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ97KW2_CLOAB
AccessionPrimary (citable) accession number: Q97KW2
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: April 14, 2009
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information