Q97K13 (Q97K13_CLOAB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lyc gene autolisin (1,4-bets-N-acetylmuramidase), family 25 of glycosyl hydrolases; peptodoglycan-binding domain EMBL AAK79082.1

Gene names

Ordered Locus Names:

CA_C1108

Organism

Clostridium acetobutylicum

Taxonomic identifier

1488 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	357 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL AAK79082.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q97K13 [UniParc]. Last modified October 1, 2001. Version 1. Checksum: 6D4C4C0B5CD0ED63	FASTA	357	40,597
	10 20 30 40 50 60 MKNKNRIVTL LTAVLVISAV IFMPLNIHAQ IYKGVDVYEY DNISNYQQLK SNGVSVVIQK 70 80 90 100 110 120 ATEGLCHNDS LLNYRYNAII QNGFKVGYYH FADNTGQPVA EAQHFLSKVQ GLHSDTILWL 130 140 150 160 170 180 DIENESNWTK WQAIDYTNKF IGYVQSQGYR IGLYSGLSFY YEYLKGNITN VPLWLASYGR 190 200 210 220 230 240 QPAQFPNIVS WQYSENERIN GVVGDIDLDY FNDSIFTGQA PRMVQSNMQV QTYNRIKTIQ 250 260 270 280 290 300 AQLNAVLYSS KLVVDGIQGN ATTQQIRVFQ QVCGLKTDGI WGQQCVNAIQ QIYGKDLCGR 310 320 330 340 350 PYIHRIPTRI IQYNMGIQFD GIYGRDTASH VQAWQSSHSL KSDGLFGSQS WLTLLSK

References

[1]

"Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum." Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R., Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F., Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V., Smith D.R. J. Bacteriol. 183:4823-4838(2001) [PubMed: 11466286] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE001437 Genomic DNA. Translation: AAK79082.1.
PIR	G97036.
RefSeq	NP_347742.1. NC_003030.1.
3D structure databases
HSSP	HSSP built from PDB template 1JFX based on UniProtKB P25310.
ProteinModelPortal	Q97K13.
ModBase	Search...
Protein family/group databases
CAZy	GH25. Glycoside Hydrolase Family 25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1117291.
GenomeReviews	Gene locus CA_C1108 in contig AE001437_GR.
KEGG	cac:CA_C1108.
NMPDR	fig|272562.1.peg.1271.
PATRIC	32036605. VBICloAce74127_1316.
Phylogenomic databases
HOGENOM	HBG417455.
OMA	QYSENER.
PhylomeDB	Q97K13.
ProtClustDB	CLSK2751871.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR002477. Peptidoglycan-bd-like. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:1.10.101.10. PGBD_1. 2 hits.
Pfam	PF01183. Glyco_hydro_25. 1 hit. PF01471. PG_binding_1. 2 hits. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF47090. PGBD_like. 2 hits.
ProtoNet	Search...

Entry information

Entry name

Q97K13_CLOAB

Accession

Primary (citable) accession number: Q97K13

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2001
Last sequence update:	October 1, 2001
Last modified:	December 14, 2011
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)