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Protein
Submitted name:

Superoxide dismutase, Cu-Zn family

Gene

sodC

Organism
Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciCACE272562:GJIH-1412-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase, Cu-Zn familyImported
Gene namesi
Name:sodCImported
Ordered Locus Names:CA_C1363Imported
OrganismiClostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)Imported
Taxonomic identifieri272562 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000000814 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272562.CA_C1363.

Structurei

3D structure databases

ProteinModelPortaliQ97JC3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000263448.
KOiK04565.
OMAiDGKTHGA.
OrthoDBiEOG6K13RS.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

Q97JC3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYFDEYQCPF LDNYDYEHRE NEDLYRQAPR RAVATIVGGP LAPNIRGTVT
60 70 80 90 100
FTSVPNGTEV SVVLNGLPPY RPAMGGRPQV GPHGFHIHQN GNCTPGTAAQ
110 120 130 140 150
PFPGTGEHWN PTNQPHGNHA GDFPVVFSNN GYARMTFFTN KFRVPQVIGK
160 170 180
SVVLHESPDD YRTQPAGASG RKVACGVIRA VR
Length:182
Mass (Da):19,990
Last modified:October 1, 2001 - v1
Checksum:i11750B4ED9003F57
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001437 Genomic DNA. Translation: AAK79331.1.
PIRiH97067.
RefSeqiNP_347991.1. NC_003030.1.
WP_010964672.1. NC_003030.1.

Genome annotation databases

EnsemblBacteriaiAAK79331; AAK79331; CA_C1363.
GeneIDi1117546.
KEGGicac:CA_C1363.
PATRICi32037109. VBICloAce74127_1568.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001437 Genomic DNA. Translation: AAK79331.1.
PIRiH97067.
RefSeqiNP_347991.1. NC_003030.1.
WP_010964672.1. NC_003030.1.

3D structure databases

ProteinModelPortaliQ97JC3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272562.CA_C1363.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK79331; AAK79331; CA_C1363.
GeneIDi1117546.
KEGGicac:CA_C1363.
PATRICi32037109. VBICloAce74127_1568.

Phylogenomic databases

HOGENOMiHOG000263448.
KOiK04565.
OMAiDGKTHGA.
OrthoDBiEOG6K13RS.

Enzyme and pathway databases

BioCyciCACE272562:GJIH-1412-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787Imported.

Entry informationi

Entry nameiQ97JC3_CLOAB
AccessioniPrimary (citable) accession number: Q97JC3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: May 27, 2015
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.