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Protein

Glycogen synthase

Gene

glgA

Organism
Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathway: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciCACE272562:GJIH-2288-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:CA_C2239
OrganismiClostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Taxonomic identifieri272562 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000000814 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 477477Glycogen synthasePRO_0000188607Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272562.CA_C2239.

Structurei

3D structure databases

ProteinModelPortaliQ97GX6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q97GX6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKILFASSES YPFIKTGGLG DVSYALPKAL RKIGIDARVI IPKYSDIPEY
60 70 80 90 100
FRYNTHHIAS FGVPVGWRSQ YGGLEYYEYD GVPFYFIDND YYFKRSGLYG
110 120 130 140 150
YYDDGERFAY FSRGVLQAIT YMQDFNPDII QCNDWQTAII PVLLKDHYRN
160 170 180 190 200
YRNYNHIKTI FTIHNLKYQG VFGKSVLGEL LCLNEGYYNE NALKFYDGIS
210 220 230 240 250
FMKGGILFSD KLSTVSRTYA EEIKDPYYGE HLDGLLRSRS YDLWGIVNGI
260 270 280 290 300
DYDILNPETD KDLFFNFDSS TLYNKTKNKI ELQKMLNLPV SENIPMIGIV
310 320 330 340 350
SRLVSQKGLD LISCVLEDLL QDGIQLVVLG TGDAKYENMF KYFAWKYPNK
360 370 380 390 400
LSANIQFNNS LAQKIYGASD MFLMPSKFEP CGIGQLIALR YGSLPIVRET
410 420 430 440 450
GGLKDTVRPF NPITGEGNGF SFTNYNAHDM LHVIRNAEYF YYNEKYNWNK
460 470
LVQTAMNDDN SWSKSAEIYR NLYMSVL
Length:477
Mass (Da):55,070
Last modified:October 1, 2001 - v1
Checksum:i974122C6A46FAAD6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001437 Genomic DNA. Translation: AAK80196.1.
PIRiA97176.
RefSeqiNP_348856.1. NC_003030.1.
WP_010965537.1. NC_003030.1.

Genome annotation databases

EnsemblBacteriaiAAK80196; AAK80196; CA_C2239.
GeneIDi1118422.
KEGGicac:CA_C2239.
PATRICi32038855. VBICloAce74127_2440.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001437 Genomic DNA. Translation: AAK80196.1.
PIRiA97176.
RefSeqiNP_348856.1. NC_003030.1.
WP_010965537.1. NC_003030.1.

3D structure databases

ProteinModelPortaliQ97GX6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272562.CA_C2239.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK80196; AAK80196; CA_C2239.
GeneIDi1118422.
KEGGicac:CA_C2239.
PATRICi32038855. VBICloAce74127_2440.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciCACE272562:GJIH-2288-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787.

Entry informationi

Entry nameiGLGA_CLOAB
AccessioniPrimary (citable) accession number: Q97GX6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 16, 2001
Last sequence update: October 1, 2001
Last modified: June 24, 2015
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.