Skip Header

 
Contribute Send feedback
Read comments (0) or add your own

Unreviewed, UniProtKB/TrEMBL Q97FV5 (Q97FV5_CLOAB)

Last modified June 16, 2009. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Cell wall hydrolase (Autolysin), family 25 of glycosyl hydrolases; peptodoglycan-binding domain EMBL AAK80568.1
Gene names
Ordered Locus Names: CA_C2621
OrganismClostridium acetobutylicum [Complete proteome] [HAMAP]
Taxonomic identifier1488 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length325 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q97FV5-1 [UniParc].

Last modified October 1, 2001. Version 1.
Checksum: E9725DE8779A310B

FASTA32535,566
        10         20         30         40         50         60 
MKGIDIYSGQ GNVEFSKVKL SGVEIVYIKA TEGVTYVDKT IRQFQSDAKN AGLKVGFYHF 

        70         80         90        100        110        120 
LRANNPINEA DNFLSAISGL SYDCKLAIDV EATLGQTTNQ ISSNVRKFAD YLKGKGLDVC 

       130        140        150        160        170        180 
IYTYTNFYKN NLNNSVKDLP LWVAEYGVTR PSINTPYVGF QYTENGSISG VSGAVDLNEF 

       190        200        210        220        230        240 
NDGIFINSDS RGEFIITGSD TVKIIQQQLN TLLKKGLIVD GISGASTTAA IKEFQGAMGL 

       250        260        270        280        290        300 
AQDGIWGPKT VAAVTEIYSK PTDGVKFKHY EYATRYIQYR VGGKLDGVYG PQTEANVKVW 

       310        320 
QSNHGLNADG IVGNDTWNKL LNENS 

« Hide

References

[1]"Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum."
Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R., Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F., Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V., Smith D.R.
J. Bacteriol. 183:4823-4838(2001) [PubMed: 11466286] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787.

Cross-references

Sequence databases

AE001437 Genomic DNA. Translation: AAK80568.1.
PIRE97222.
RefSeqNP_349228.1.

3D structure databases

HSSPHSSP built from PDB template 1JFX based on UniProtKB P25310.
ModBaseSearch...

Protein family/group databases

CAZyGH25. Glycoside Hydrolase Family 25.

Genome annotation databases

GeneID1118804.
GenomeReviewsGene locus CA_C2621 in contig AE001437_GR.
KEGGcac:CAC2621.
NMPDRfig|272562.1.peg.2757.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ97FV5.
OMAQ97FV5. ANNPINE.

Enzyme and pathway databases

BioCycCACE272562:CAC2621-MON.

Family and domain databases

InterProIPR002053. Glyco_hydro_25.
IPR008270. Glyco_hydro_25_AS.
IPR018077. Glyco_hydro_fam25_sg.
IPR013781. Glyco_hydro_sg_catalytic.
IPR002477. Peptidoglycan-bd-like.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:1.10.101.10. PGBD_1. 2 hits.
PfamPF01183. Glyco_hydro_25. 1 hit.
PF01471. PG_binding_1. 2 hits.
[Graphical view]
ProDomPD004620. Glyco_hydro_25. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00641. Glyco_25. 2 hits.
[Graphical view]
PROSITEPS00953. GLYCOSYL_HYDROL_F25. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

LinkHubQ97FV5.

Entry information

Entry nameQ97FV5_CLOAB
AccessionPrimary (citable) accession number: Q97FV5
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: June 16, 2009
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information