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Q97FS5 (PYRF_CLOAB) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 83. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Orotidine 5'-phosphate decarboxylase

EC=4.1.1.23
Alternative name(s):
OMP decarboxylase
Short name=OMPDCase
Short name=OMPdecase
Gene names
Name:pyrF
Ordered Locus Names:CA_C2652
OrganismClostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) [Reference proteome] [HAMAP]
Taxonomic identifier272562 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length286 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 286286Orotidine 5'-phosphate decarboxylase HAMAP-Rule MF_01200
PRO_0000134622

Sites

Active site971Proton donor By similarity

Sequences

Sequence LengthMass (Da)Tools
Q97FS5 [UniParc].

Last modified October 1, 2001. Version 1.
Checksum: 5BC7E3ACBD5FF2A4

FASTA28632,241
        10         20         30         40         50         60 
MIIDRLFDSV EKKGHVCLGL DTDITYVPEE FCKKFNSIED AIFNFNKKII DATLDVVSCY 

        70         80         90        100        110        120 
KVQIAYYEAY GLKGLLAYKR TLEYLREKKA IAIADIKRGD IAKTAEMYAK AHFEGDFEAD 

       130        140        150        160        170        180 
FVTLNPYMGL DGIEPYMPYI EKMEKGLFIL LRTSNKGAYD IQYIKTQGGK NVYDEVGEKI 

       190        200        210        220        230        240 
YDLGQKATGR SKYSSIGAVV GCTHVEEGVE IRNKFKNMFF LIPGYGAQGG TAKEVSLYLR 

       250        260        270        280 
EGNGGVVNSS RGILLAYKKE ENGEKIFDEC ARLAAINMRD EIRKTL 

« Hide

References

[1]"Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum."
Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R., Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F., Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V., Smith D.R.
J. Bacteriol. 183:4823-4838(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE001437 Genomic DNA. Translation: AAK80599.1.
PIRD97226.
RefSeqNP_349259.1. NC_003030.1.

3D structure databases

ProteinModelPortalQ97FS5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272562.CA_C2652.

Protocols and materials databases

DNASU1118835.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAK80599; AAK80599; CA_C2652.
GeneID1118835.
KEGGcac:CA_C2652.
PATRIC32039669. VBICloAce74127_2841.

Phylogenomic databases

eggNOGCOG0284.
HOGENOMHOG000245747.
KOK01591.
OMADATHHLC.
OrthoDBEOG6DZF33.

Enzyme and pathway databases

BioCycCACE272562:GJIH-2707-MONOMER.
UniPathwayUPA00070; UER00120.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
HAMAPMF_01215. OMPdecase_type2.
InterProIPR013785. Aldolase_TIM.
IPR018089. OMPdecase_AS.
IPR011995. OMPdecase_type-2.
IPR001754. OMPdeCOase_dom.
IPR011060. RibuloseP-bd_barrel.
[Graphical view]
PfamPF00215. OMPdecase. 1 hit.
[Graphical view]
SMARTSM00934. OMPdecase. 1 hit.
[Graphical view]
SUPFAMSSF51366. SSF51366. 1 hit.
TIGRFAMsTIGR02127. pyrF_sub2. 1 hit.
PROSITEPS00156. OMPDECASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePYRF_CLOAB
AccessionPrimary (citable) accession number: Q97FS5
Entry history
Integrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: October 1, 2001
Last modified: May 14, 2014
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways