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Unreviewed, UniProtKB/TrEMBL Q97F93 (Q97F93_CLOAB)

Last modified February 9, 2010. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Ribosome-associated protein Y (PSrp-1) EMBL AAK80791.1
Gene names
Ordered Locus Names: CA_C2847
OrganismClostridium acetobutylicum [Complete proteome] [HAMAP]
Taxonomic identifier1488 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

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Protein attributes

Sequence length174 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level.

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Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processprimary metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionbinding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
Q97F93-1 [UniParc].

Last modified October 1, 2001. Version 1.
Checksum: D73A491582003F8E

FASTA17420,293
        10         20         30         40         50         60 
MKLIVSGKNL EVTEGLREAV EKQISKLEKY FKPEVEAHVT LSVEKNRQIV EVTIPFNGVI 

        70         80         90        100        110        120 
LRGEETNNDM YASIDIVGDK LERQVRKQKT KLERRKYSDS LKFQNIPDYH KEEQEPEIVK 

       130        140        150        160        170 
TKRFAIKPMS EEEAVLEMEL LGHNFFVFQN GDSNEVNVVY KRKDGNYGLI EPEF

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References

[1]"Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum."
Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R., Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F., Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V., Smith D.R.
J. Bacteriol. 183:4823-4838(2001) [PubMed: 11466286] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE001437 Genomic DNA. Translation: AAK80791.1.
PIRD97250.
RefSeqNP_349451.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3KA5X-ray1.80A/B117-173[»]
SMRQ97F93. Positions 3-112.
ModBaseSearch...

Genome annotation databases

GeneID1119030.
GenomeReviewsGene locus CA_C2847 in contig AE001437_GR.
KEGGcac:CAC2847.
NMPDRfig|272562.1.peg.2980.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG675832.
OMANVVYKRK.
PhylomeDBQ97F93.

Enzyme and pathway databases

BioCycCACE272562:CAC2847-MONOMER.

Family and domain databases

InterProIPR003489. Ribosomal_S30Ae/sigma54_mod.
[Graphical view]
Gene3DG3DSA:3.30.160.100. Ribosomal_S30Ae/sigma54_mod. 1 hit.
PfamPF02482. Ribosomal_S30AE. 1 hit.
[Graphical view]
TIGRFAMsTIGR00741. yfiA. 1 hit.
ProtoNetSearch...

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Entry information

Entry nameQ97F93_CLOAB
AccessionPrimary (citable) accession number: Q97F93
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: February 9, 2010
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information