Q97F93 (Q97F93_CLOAB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribosome-associated protein Y (PSrp-1) EMBL AAK80791.1

Gene names

Ordered Locus Names:

CA_C2847

Organism

Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)

Taxonomic identifier

272562 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	174 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 3KA5 Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	primary metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q97F93 [UniParc]. Last modified October 1, 2001. Version 1. Checksum: D73A491582003F8E	FASTA	174	20,293
	10 20 30 40 50 60 MKLIVSGKNL EVTEGLREAV EKQISKLEKY FKPEVEAHVT LSVEKNRQIV EVTIPFNGVI 70 80 90 100 110 120 LRGEETNNDM YASIDIVGDK LERQVRKQKT KLERRKYSDS LKFQNIPDYH KEEQEPEIVK 130 140 150 160 170 TKRFAIKPMS EEEAVLEMEL LGHNFFVFQN GDSNEVNVVY KRKDGNYGLI EPEF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum." Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R., Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F., Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V., Smith D.R. J. Bacteriol. 183:4823-4838(2001) [PubMed: 11466286] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787.
[2]	"Crystal structure of Ribosome-associated protein Y (PSrp-1) from Clostridium acetobutylicum." Seetharaman J., Neely H., Wang D., Janjua H., Cunningham K., Owens L., Xiao R., Liu J., Baran M.C., Acton T.B., Rost B., Montelione G.T., Hunt J.F., Tong L. Submitted (OCT-2009) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 117-173.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE001437 Genomic DNA. Translation: AAK80791.1.

PIR

D97250.

RefSeq

NP_349451.1. NC_003030.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3KA5	X-ray	1.80	A/B	117-173	[»]

ProteinModelPortal

Q97F93.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

1119030.

GenomeReviews

Gene locus CA_C2847 in contig AE001437_GR.

KEGG

cac:CA_C2847.

PATRIC

32040101. VBICloAce74127_3033.

Phylogenomic databases

HOGENOM

HOG000074927.

KO

K05808.

OMA

YKRKDGN.

ProtClustDB

CLSK883292.

Family and domain databases

Gene3D

G3DSA:3.30.160.100. Ribosomal_S30Ae/sigma54_mod. 1 hit.

InterPro

IPR003489. Ribosomal_S30Ae/sigma54_mod.
[Graphical view]

Pfam

PF02482. Ribosomal_S30AE. 1 hit.
[Graphical view]

SUPFAM

SSF69754. Ribosomal_S30Ae/sigma54_mod. 1 hit.

TIGRFAMs

TIGR00741. YfiA. 1 hit.

ProtoNet

Search...

Other

EvolutionaryTrace

Q97F93.

Entry information

Entry name

Q97F93_CLOAB

Accession

Primary (citable) accession number: Q97F93

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2001
Last sequence update:	October 1, 2001
Last modified:	May 16, 2012
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)