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Protein
Submitted name:

DNA binding protein HU

Gene

hbs

Organism
Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
DNA binding protein HUImported
Gene namesi
Name:hbsImported
Ordered Locus Names:CA_C3211Imported
OrganismiClostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)Imported
Taxonomic identifieri272562 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
Proteomesi
  • UP000000814 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272562.CA_C3211.

Structurei

3D structure databases

ProteinModelPortaliQ97EA3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial histone-like protein family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105K70. Bacteria.
COG0776. LUCA.
HOGENOMiHOG000043828.
KOiK03530.
OMAiGSWSVSK.

Family and domain databases

Gene3Di4.10.520.10. 1 hit.
InterProiIPR000119. Hist_DNA-bd.
IPR010992. IHF-like_DNA-bd_dom.
[Graphical view]
PfamiPF00216. Bac_DNA_binding. 1 hit.
[Graphical view]
PRINTSiPR01727. DNABINDINGHU.
SMARTiSM00411. BHL. 1 hit.
[Graphical view]
SUPFAMiSSF47729. SSF47729. 1 hit.

Sequencei

Sequence statusi: Complete.

Q97EA3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKAELITSI SEKSKLTKKD AEVALKAFIE SVEETLEKHE KVQLVGFGTF
60 70 80 90
ETRERAERKG RNPRSKEEIV IPASTVPVFK AGKEFKERVN K
Length:91
Mass (Da):10,347
Last modified:October 1, 2001 - v1
Checksum:i8E7E87EDDFEA36D2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001437 Genomic DNA. Translation: AAK81147.1.
PIRiH97294.
RefSeqiNP_349807.1. NC_003030.1.
WP_010966487.1. NC_003030.1.

Genome annotation databases

EnsemblBacteriaiAAK81147; AAK81147; CA_C3211.
GeneIDi1119393.
KEGGicac:CA_C3211.
PATRICi32040847. VBICloAce74127_3390.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001437 Genomic DNA. Translation: AAK81147.1.
PIRiH97294.
RefSeqiNP_349807.1. NC_003030.1.
WP_010966487.1. NC_003030.1.

3D structure databases

ProteinModelPortaliQ97EA3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272562.CA_C3211.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK81147; AAK81147; CA_C3211.
GeneIDi1119393.
KEGGicac:CA_C3211.
PATRICi32040847. VBICloAce74127_3390.

Phylogenomic databases

eggNOGiENOG4105K70. Bacteria.
COG0776. LUCA.
HOGENOMiHOG000043828.
KOiK03530.
OMAiGSWSVSK.

Family and domain databases

Gene3Di4.10.520.10. 1 hit.
InterProiIPR000119. Hist_DNA-bd.
IPR010992. IHF-like_DNA-bd_dom.
[Graphical view]
PfamiPF00216. Bac_DNA_binding. 1 hit.
[Graphical view]
PRINTSiPR01727. DNABINDINGHU.
SMARTiSM00411. BHL. 1 hit.
[Graphical view]
SUPFAMiSSF47729. SSF47729. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ97EA3_CLOAB
AccessioniPrimary (citable) accession number: Q97EA3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: November 2, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.